Mantav1 Operator Guide
This document is obsolete. There are now two active major versions of Manta and two active versions of the Manta Operator Guide. Please visit the appropriate link below for your version of Manta:
This page will remain as convenience for the time being, but might be out of date with the latest Mantav1 Operator Guide. See the mantav2 document for details on mantav2 vs. mantav1.
Manta (v1) is an internet-facing object store with in-situ Unix-based compute as a first class operation. The user interface to Manta is essentially:
- A filesystem-like namespace, with directories and objects, accessible over HTTP
- Objects are arbitrary-size blobs of data
- Users can use standard HTTP
PUT
/GET
/DELETE
verbs to create and remove directories and objects as well as to list directories - Users can fetch arbitrary ranges of an object, but may not modify an object except by replacing it
- Users submit map-reduce compute jobs that run arbitrary Unix programs on their objects.
Users can interact with Manta through the official Node.js CLI; the Joyent user portal; the Node, Python, Ruby, or Java SDKs; curl(1); or any web browser.
For more information, see the official public user documentation. Before reading this document, you should be very familiar with using Manta, including both the CLI tools and the compute jobs features. You should also be comfortable with all the reference material on how the system works from a user's perspective.
Architecture basics
Design constraints
Horizontal scalability. It must be possible to add more hardware to scale any component within Manta without downtime. As a result of this constraint, there are multiple instances of each service.
Strong consistency. In the face of network partitions where it's not possible to remain both consistent and available, Manta chooses consistency. So if all three datacenters in a three-DC deployment become partitioned from one another, requests may fail rather than serve potentially incorrect data.
High availability. Manta must survive failure of any service, physical server, rack, or even an entire datacenter, assuming it's been deployed appropriately. Development installs of Manta can fit on a single system, and obviously those don't survive server failure, but several production deployments span three datacenters and survive partitioning or failure of an entire datacenter without downtime for the other two.
Basic terminology
We use nodes to refer to physical servers. Compute nodes mean the same thing they mean in Triton, which is any physical server that's not a head node. Storage nodes are compute nodes that are designated to store actual Manta objects. These are the same servers that run users' compute jobs, but we don't call those compute nodes because that would be confusing with the Triton terminology.
A Manta install uses:
- a headnode (see "Manta and Triton" below)
- one or more storage nodes to store user objects and run compute jobs
- one or more non-storage compute nodes for the other Manta services.
We use the term datacenter (or DC) to refer to an availability zone (or AZ). Each datacenter represents a single Triton deployment (see below). Manta supports being deployed in either 1 or 3 datacenters within a single region, which is a group of datacenters having a high-bandwidth, low-latency network connection.
Manta and Triton (SDC)
Manta is built atop Triton (formerly known as SmartDataCenter). A three-datacenter deployment of Manta is built atop three separate Triton deployments. The presence of Manta does not change the way Triton is deployed or operated. Administrators still have AdminUI, APIs, and they're still responsible for managing the Triton services, platform versions, and the like through the normal Triton mechanisms.
Components of Manta
All user-facing Manta functionality can be divided into a few major subsystems:
- The storage tier is responsible for storing the physical copies of user objects on disk. Storage nodes store objects as files with random uuids. So within each storage node, the objects themselves are effectively just large, opaque blobs of data.
- The metadata tier is responsible for storing metadata about each object that's visible from the public Manta API. This metadata includes the set of storage nodes on which the physical copy is stored.
- The jobs subsystem (also called Marlin) is responsible for executing user programs on the objects stored in the storage tier.
In order to make all this work, there are several other pieces:
- The front door is made up of the SSL terminators, load balancers, and API servers that actually handle user HTTP requests. All user interaction with Manta happens over HTTP (even compute jobs), so the front door handles all user-facing operations.
- An authentication cache maintains a read-only copy of the Joyent account database. All front door requests are authenticated against this cache.
- A garbage collection and auditing system periodically compares the contents of the metadata tier with the contents of the storage tier to identify deleted objects, remove them, and verify that all other objects are replicated as they should be.
- An accelerated garbage collection system that leverages some additional constraints on object uploads to allow for faster space reclamation.
- A metering system periodically processes log files generated by the rest of the system to produce reports that are ultimately turned into invoices.
- A couple of dashboards provide visibility into what the system is doing at any given point.
- A consensus layer is used to keep track of primary-secondary relationships in the metadata tier.
- DNS-based nameservices are used to keep track of all instances of all services in the system.
Services, instances, and agents
Just like with Triton, components are divided into services, instances, and agents. Services and instances are SAPI concepts.
A service is a group of instances of the same kind. For example, "jobsupervisor" is a service, and there may be multiple jobsupervisor zones. Each zone is an instance of the "jobsupervisor" service. The vast majority of Manta components are service instances, and there are several different services involved.
Agents are components that run in the global zone. Manta uses one agent on each storage node called the marlin agent in order to manage the execution of user compute jobs on each storage node.
Note: Do not confuse SAPI services with SMF services. We're talking about SAPI services here. A given SAPI instance (which is a zone) may have many SMF services.
Manta components at a glance
Kind | Major subsystem | Service | Purpose | Components |
---|---|---|---|---|
Service | Consensus | nameservice | Service discovery | ZooKeeper, binder (DNS) |
Service | Front door | loadbalancer | SSL termination and load balancing | stud, haproxy/muppet |
Service | Front door | webapi | Manta HTTP API server | muskie |
Service | Front door | authcache | Authentication cache | mahi (redis) |
Service | Metadata | postgres | Metadata storage and replication | postgres, manatee |
Service | Metadata | moray | Key-value store | moray |
Service | Metadata | electric-moray | Consistent hashing (sharding) | electric-moray |
Service | Storage | storage | Object storage and capacity reporting | mako (nginx), minnow |
Service | Operations | ops | GC, audit, and metering cron jobs | mola, mackerel |
Service | Operations | madtom | Web-based Manta monitoring | madtom |
Service | Operations | marlin-dashboard | Web-based Marlin monitoring | marlin-dashboard |
Service | Compute | jobsupervisor | Distributed job orchestration | jobsupervisor |
Service | Compute | jobpuller | Job archival | wrasse |
Service | Compute | marlin | Compute containers for end users | marlin-lackey |
Agent | Compute | marlin-agent | Job execution on each storage node | marlin-agent |
Agent | Compute | medusa | Interactive Session Engine | medusa |
Consensus and internal service discovery
In some sense, the heart of Manta (and Triton) is a service discovery mechanism (based on ZooKeeper) for keeping track of which service instances are running. In a nutshell, this works like this:
- Setup: There are 3-5 "nameservice" zones deployed that form a ZooKeeper cluster. There's a "binder" DNS server in each of these zones that serves DNS requests based on the contents of the ZooKeeper data store.
- Setup: When other zones are deployed, part of their configuration includes the IP addresses of the nameservice zones. These DNS servers are the only components that each zone knows about directly.
- When an instance starts up (e.g., a "moray" zone), an SMF service called the registrar connects to the ZooKeeper cluster (using the IP addresses configured with the zone) and publishes its own IP to ZooKeeper. A moray zone for shard 1 in region "us-east" publishes its own IP under "1.moray.us-east.joyent.us".
- When a client wants to contact the shard 1 moray, it makes a DNS request for 1.moray.us-east.joyent.us using the DNS servers in the ZooKeeper cluster. Those DNS servers returns all IPs that have been published for 1.moray.us-east.joyent.us.
- If the registrar in the 1.moray zone dies, the corresponding entry in the ZooKeeper data store is automatically removed, causing that zone to fall out of DNS. Due to DNS TTLs of 60s, it may take up to a minute for clients to notice that the zone is gone.
Internally, most services work this way.
External service discovery
Since we don't control Manta clients, the external service discovery system is
simpler and more static. We manually configure the public
us-east.manta.joyent.com
DNS name to resolve to each of the loadbalancer
public IP addresses. After a request reaches the loadbalancers, everything uses
the internal service discovery mechanism described above to contact whatever
other services they need.
Storage tier
The storage tier is made up of Mantis Shrimp nodes. Besides having a great deal of physical storage in order to store users' objects, these systems have lots of DRAM in order to support a large number of marlin compute zones, where we run user programs directly on their data.
Each storage node has an instance of the storage service, also called a "mako" or "shark" (as in: a shard of the storage tier). Inside this zone runs:
- mako: an nginx instance that supports simple PUT/GET for objects. This is
not the front door; this is used internally to store each copy of a user
object. Objects are stored in a ZFS delegated dataset inside the storage
zone, under
/manta/$account_uuid/$object_uuid
. - minnow: a small Node service that periodically reports storage capacity data into the metadata tier so that the front door knows how much capacity each storage node has.
In addition to the "storage" zone, each storage node has some number of marlin zones (or compute zones). These are essentially blank zones in which we run user programs. We currently configure 128 of these zones on each storage node.
Metadata tier
The metadata tier is itself made up of three levels:
- "postgres" zones, which run instances of the postgresql database
- "moray" zones, which run a key-value store on top of postgres
- "electric-moray" zones, which handle sharding of moray requests
Postgres, replication, and sharding
All object metadata is stored in PostgreSQL databases. Metadata is keyed on the object's name, and the value is a JSON document describing properties of the object including what storage nodes it's stored on.
This part is particularly complicated, so pay attention! The metadata tier is replicated for availability and sharded for scalability.
It's easiest to think of sharding first. Sharding means dividing the entire namespace into one or more shards in order to scale horizontally. So instead of storing objects A-Z in a single postgres database, we might choose two shards (A-M in shard 1, N-Z in shard 2), or three shards (A-I in shard 1, J-R in shard 2, S-Z in shard 3), and so on. Each shard is completely separate from the others. They don't overlap at all in the data that they store. The shard responsible for a given object is determined by consistent hashing on the directory name of the object. So the shard for "/mark/stor/foo" is determined by hashing "/mark/stor".
Within each shard, we use multiple postgres instances for high availability. At any given time, there's a primary peer (also called the "master"), a secondary peer (also called the "synchronous slave"), and an async peer (sometimes called the "asynchronous slave"). As the names suggest, we configure synchronous replication between the primary and secondary, and asynchronous replication between the secondary and the async peer. Synchronous replication means that transactions must be committed on both the primary and the secondary before they can be committed to the client. Asynchronous replication means that the asynchronous peer may be slightly behind the other two.
The idea with configuration replication in this way is that if the primary crashes, we take several steps to recover:
- The shard is immediately marked read-only.
- The secondary is promoted to the primary.
- The async peer is promoted to the secondary. With the shard being read-only, it should quickly catch up.
- Once the async peer catches up, the shard is marked read-write again.
- When the former primary comes back online, it becomes the asynchronous peer.
This allows us to quickly restore read-write service in the event of a postgres crash or an OS crash on the system hosting the primary. This process is managed by the "manatee" component, which uses ZooKeeper for leader election to determine which postgres will be the primary at any given time.
It's really important to keep straight the difference between sharding and replication. Even though replication means that we have multiple postgres instances in each shard, only the primary can be used for read/write operations, so we're still limited by the capacity of a single postgres instance. That's why we have multiple shards.
Other shards
There are actually three kinds of metadata in Manta:
- Object metadata, which is sharded as described above. This may be medium to high volume, depending on load.
- Storage node capacity metadata, which is reported by "minnow" instances (see above) and all lives on one shard. This is extremely low-volume: a couple of writes per storage node per minute.
- Compute job state, which is all stored on a single shard. This is extremely high volume, depending on job load.
In the us-east production deployment, shard 1 stores compute job state and storage node capacity. Shards 2-4 store the object metadata.
Manta supports resharding object metadata, which would typically be used to add an additional shard (for additional capacity). This operation has never been needed (or used) in production. Assuming the service is successful, that's likely just a matter of time.
Moray
For each metadata shard (which we said above consists of three PostgreSQL databases), there's two or more "moray" instances. Moray is a key-value store built on top of postgres. Clients never talk to postgres directly; they always talk to Moray. (Actually, they generally talk to electric-moray, which proxies requests to Moray. See below.) Moray keeps track of the replication topology (which Postgres instances is the primary, which is the secondary, and which is the async) and directs all read/write requests to the primary Postgres instance. This way, clients don't need to know about the replication topology.
Like Postgres, each Moray instance is tied to a particular shard. These are typically referred to as "1.moray", "2.moray", and so on.
Electric-moray
The electric-moray service sits in front of the sharded Moray instances and
directs requests to the appropriate shard. So if you try to update or fetch the
metadata for /mark/stor/foo
, electric-moray will hash /mark/stor
to find the
right shard and then proxy the request to one of the Moray instances operating
that shard.
The front door
The front door consists of "loadbalancer" and "webapi" zones.
"loadbalancer" zones actually run both stud (for SSL termination) and haproxy (for load balancing across the available "webapi" instances). "haproxy" is managed by a component called "muppet" that uses the DNS-based service discovery mechanism to keep haproxy's list of backends up-to-date.
"webapi" zones run the Manta-specific API server, called muskie. Muskie handles PUT/GET/DELETE requests to the front door, including requests to:
- create and delete objects
- create, list, and delete directories
- create compute jobs, submit input, end input, fetch inputs, fetch outputs, fetch errors, and cancel jobs
- create multipart uploads, upload parts, fetch multipart upload state, commit multipart uploads, and abort multipart uploads
Objects and directories
Requests for objects and directories involve:
- validating the request
- authenticating the user (via mahi, the auth cache)
- looking up the requested object's metadata (via electric moray)
- authorizing the user for access to the specified resource
For requests on directories and zero-byte objects, the last step is to update or return the right metadata.
For write requests on objects, muskie then:
- Constructs a set of candidate storage nodes that will be used to store the object's data, where each storage node is located in a different datacenter (in a multi-DC configuration). By default, there are two copies of the data, but users can configure this by setting the durability level with the request.
- Tries to issue a PUT with 100-continue to each of the storage nodes in the candidate set. If that fails, try another set. If all sets are exhausted, fail with 503.
- Once the 100-continue is received from all storage nodes, the user's data is streamed to all nodes. Upon completion, there should be a 204 response from each storage node.
- Once the data is safely written to all nodes, the metadata tier is updated (using a PUT to electric-moray), and a 204 is returned to the client. At this point, the object's data is recorded persistently on the requested number of storage nodes, and the metadata is replicated on at least two index nodes.
For read requests on objects, muskie instead contacts each of the storage nodes hosting the data and streams data from whichever one responds first to the client.
Compute jobs
Requests to manipulate compute jobs generally translate into creating or listing job-related Moray records:
- When the user submits a request to create a job, muskie creates a new job record in Moray.
- When the user submits a request to add an input, muskie creates a new job input record in Moray.
- When the user submits a request to cancel a job or end input, muskie modifies the job record in Moray.
- When the user lists inputs, outputs, or errors, muskie lists job input records, task output records, or error records.
All of these requests operate on the shard storing all of the compute node metadata. These requests do not go through electric-moray.
Compute tier (a.k.a., Marlin)
There are three core components of Marlin:
- A small fleet of supervisors manages the execution of jobs. (Supervisors used to be called workers, and you may still see that terminology). Supervisors pick up new inputs, locate the servers where the input objects are stored, issue tasks to execute on those servers, monitor the execution of those tasks, and decide when the job is done. Each supervisor can manage many jobs, but each job is managed by only one supervisor at a time.
- Job tasks execute directly on the Manta storage nodes. Each node has an agent (i.e., the "marlin agent") running in the global zone that manages tasks assigned to that node and the zones available for running those tasks.
- Within each compute zone, task execution is managed by a lackey under the control of the agent.
All of Marlin's state is stored in Moray. A few other components are involved in executing jobs:
- Muskie handles all user requests related to jobs: creating jobs, submitting input, and fetching status, outputs, and errors. To create jobs and submit inputs, Muskie creates and updates records in Moray. See above for details.
- Wrasse (the jobpuller) is a separate component that periodically scans for recently completed jobs, archives the saved state into flat objects back in Manta, and then removes job state from Moray. This is critical to keep the database that manages job state from growing forever.
Distributed execution
When the user runs a "map" job, Muskie receives client requests to create the job, to add inputs to the job, and to indicate that there will be no more job inputs. Jobsupervisors compete to take newly assigned jobs, and exactly one will win and become responsible for orchestrating the execution of the job. As inputs are added, the supervisor resolves each object's name to the internal uuid that identifies the object and checks whether the user is allowed to access that object. Assuming the user is authorized for that object, the supervisor locates all copies of the object in the fleet, selects one, and issues a task to an agent running on the server where that copy is stored. This process is repeated for each input object, distributing work across the fleet.
The agent on the storage server accepts the task and runs the user's script in an isolated compute zone. It records any outputs emitted as part of executing the script. When the task has finished running, the agent marks it completed. The supervisor commits the completed task, marking its outputs as final job outputs. When there are no more unprocessed inputs and no uncommitted tasks, the supervisor declares the job done.
If a task fails for a retryable reason, it will be retried a few times, preferably on different servers. If it keeps failing, an error is produced.
Multi-phase map jobs are similar except that the outputs of each first-phase map task become inputs to a new second-phase map task, and only the outputs of the second phase become outputs of the job.
Reducers run like mappers, except that the input for a reducer is not completely known until the previous phase has already completed, and reducers can read an arbitrary number of inputs so the inputs themselves are dispatched as individual records and a separate end-of-input must be issued before the reducer can complete.
Local execution
The agent on each storage server maintains a fixed set of compute zones in which user scripts can be run. When a map task arrives, the agent locates the file representing the input object on the local filesystem, finds a free compute zone, maps the object into the local filesystem, and runs the user's script, redirecting stdin from the input file and stdout to a local file. When the script exits, assuming it succeeds, the output file is saved as an object in the object store, recorded as an output from the task, and the task is marked completed. If there is more work to be done for the same job, the agent may choose to run it in the same compute zone without doing anything to clean up after the first one. When there is no more work to do, or the agent decides to repurpose the compute zone for another job, the compute zone is halted, the filesystem rolled back to its pristine state, and the zone is booted again to run the next task. Since the compute zones themselves are isolated from one another and they are fully rebooted and rolled back between jobs, there is no way for users' jobs to see or interfere with other jobs running in the system.
Internal communication within Marlin
The system uses a Moray/PostgreSQL shard for all communication. There are buckets for jobs, job inputs, tasks, task inputs (for reduce tasks), task outputs, and errors. Supervisors and agents poll for new records applicable to them. For example, supervisors poll for tasks assigned to them that have been completed but not committed and agents poll for tasks assigned to them that have been dispatched but not accepted.
Multipart uploads
Multipart uploads provide an alternate way for users to upload Manta objects. The user creates the multipart upload, uploads the object in parts, and exposes the object in Manta by committing the multipart upload. Generally, these operations are implemented using existing Manta constructs:
- Parts are normal Manta objects, with a few key differences. Users cannot use the GET, POST or DELETE HTTP methods on parts. Additionally, all parts are co-located on the same set of storage nodes, which are selected when the multipart upload is created.
- All parts for a given multipart upload are stored in a parts directory, which is a normal Manta directory.
- Part directories are stored in the top-level
/$MANTA_USER/uploads
directory tree.
Most of the logic for multipart uploads is performed by Muskie, but there are some additional features of the system only used for multipart uploads:
- the manta_uploads bucket in Moray stores finalizing records for a given shard. A finalizing record is inserted atomically with the target object record when a multipart upload is committed.
- the mako zones have a custom mako-finalize operation invoked by muskie when a multipart upload is committed. This operation creates the target object from the parts and subsequently deletes the parts from disk. This operation is invoked on all storage nodes that will contain the target object when the multipart upload is committed.
Garbage collection, auditing, and metering
Garbage collection, auditing, and metering all run as cron jobs out of the "ops" zone.
Garbage collection is the process of freeing up storage used for objects which no longer exist. When an object is deleted, muskie records that event in a log and removes the metadata from Moray, but does not actually remove the object from storage servers because there may have been other links to it. The garbage collection job (called "mola") processes these logs, along with dumps of the metadata tier (taken periodically and stored into Manta), and determines which objects can safely be deleted. These delete requests are batched and sent to each storage node, which moves the objects to a "tombstone" area. Objects in the tombstone area are deleted after a fixed interval.
Multipart upload garbage collection is the process of cleaning up data associated with finalized multipart uploads. When a multipart upload is finalized (committed or aborted), there are several items associated with it that need to be cleaned up, including:
- its upload directory metadata
- part object metadata
- part data on disk (if not removed during the
mako-finalize
operation) - its finalizing metadata
Similar to the basic garbage collection job, there is a multipart upload garbage collection job that operates on dumps of the metadata tier to determine what data associated with multipart uploads can be safely deleted. A separate operation deletes these items after the job has been completed.
Auditing is the process of ensuring that each object is replicated as expected. This is a similar job run over the contents of the metadata tier and manifests reported by the storage nodes.
Metering is the process of measuring how much resource each user used, both for reporting and billing. There's compute metering (how much compute time was used), storage metering (how much storage is used), request metering, and bandwidth metering. These are compute jobs run over the compute logs (produced by the marlin agent), the metadata dumps, and the muskie request logs.
Accelerated Garbage Collection
Accelerated garbage-collection is a mechanism for lower latency storage space
reclamation for objects owned by accounts whose data is guaranteed not to be
snaplinked. Unlike traditional garbage-collection, accelerated garbage-collection
does not rely on the jobs-tier or backups of the metadata tier. However, the
actual object file deletion is still done with the cron-scheduled mako_gc.sh
script.
Manta's offline garbage-collection system relies on a Manta job that periodically
processes database dumps from all shards to locate unreferenced object data and
mark it for cleanup. Objects which are found to only be referenced in the
manta_delete_log
after a system-wide grace-period are marked for deletion.
This grace-period is intended to reduce the probability of deleting a snaplinked
object. The reason the system processes database dumps from all shards is that,
in a traditional setting, a single object may have multiple references on different
metadata nodes.
Accelerated garbage-collection processes only objects that are owned by
snaplink-disabled accounts. Such objects are guaranteed to have a single
metadata reference, and the delete records generated for them are added to the
manta_fastdelete_queue
as opposed to the manta_delete_log
. A
"garbage-collector" reads records from the queue and marks the corresponding
objects for deletion. Since metadata records are removed from the manta
table
and added to the manta_fastdelete_queue
in the same database transaction, rows
in the manta_fastdelete_queue
refer to objects that are no longer visible to
Manta users.
For Manta users whose data has never been snaplinked, the system provides an option to trade Manta's snaplink functionality for lower-latency storage space reclamation. While accelerated GC can be deployed in conjuction with the traditional offline GC system, it will only process objects owned by snaplink-disabled accounts. Objects owned by other accounts will continue to be processed by the traditional garbage-collection pipeline.
Manta Scalability
There are many dimensions to scalability.
In the metadata tier:
- number of objects (scalable with additional shards)
- number of objects in a directory (fixed, currently at a few million objects)
In the storage tier:
- total size of data (scalable with additional storage servers)
- size of data per object (limited to the amount of storage on any single system, typically in the tens of terabytes, which is far larger than is typically practical)
In terms of performance:
- total bytes in or out per second (depends on network configuration)
- count of concurrent requests (scalable with additional metadata shards or API servers)
- count of compute tasks executed per second (scalable with additional storage nodes)
- count of concurrent compute tasks (could be measured in tasks, CPU cores available, or DRAM availability; scaled with additional storage node hardware)
As described above, for most of these dimensions, Manta can be scaled horizontally by deploying more software instances (often on more hardware). For a few of these, the limits are fixed, but we expect them to be high enough for most purposes. For a few others, the limits are not known, and we've never (or rarely) run into them, but we may need to do additional work when we discover where these limits are.
Planning a Manta deployment
Before even starting to deploy Manta, you must decide:
- the number of datacenters
- the number of metadata shards
- the number of storage and non-storage compute nodes
- how to lay out the non-storage zones across the fleet
Choosing the number of datacenters
You can deploy Manta across any odd number of datacenters in the same region (i.e., having a reliable low-latency, high-bandwidth network connection among all datacenters). We've only tested one- and three-datacenter configurations. Even-numbered configurations are not supported. See "Other configurations" below for details.
A single-datacenter installation can be made to survive server failure, but obviously cannot survive datacenter failure. The us-east deployment uses three datacenters.
Choosing the number of metadata shards
Recall that each metadata shard has the storage and load capacity of a single postgres instance. If you want more capacity than that, you need more shards. Shards can be added later without downtime, but it's a delicate operation. The us-east deployment uses three metadata shards, plus a separate shard for the compute and storage capacity data.
We recommend at least two shards so that the compute and storage capacity information can be fully separated from the remaining shards, which would be used for metadata.
Choosing the number of storage and non-storage compute nodes
The two classes of node (storage nodes and non-storage nodes) usually have different hardware configurations.
The number of storage nodes needed is a function of the expected data footprint and (secondarily) the desired compute capacity.
The number of non-storage nodes required is a function of the expected load on the metadata tier. Since the point of shards is to distribute load, each shard's postgres instance should be on a separate compute node. So you want at least as many compute nodes as you will have shards. The us-east deployment distributes the other services on those same compute nodes.
For information on the latest recommended production hardware, see Joyent Manufacturing Matrix and Joyent Manufacturing Bill of Materials.
The us-east deployment uses older versions of the Tenderloin-A for service nodes and Mantis Shrimps for storage nodes.
Choosing how to lay out zones
Since there are so many different Manta components, and they're all deployed redundantly, there are a lot of different pieces to think about. (The production deployment in us-east has 21 zones in each of the three datacenters, not including the Marlin compute zones.) So when setting up a Manta deployment, it's very important to think ahead of time about which components will run where!
The manta-adm genconfig
tool (when used with the --from-file option) can be
very helpful in laying out zones for Manta. See the manta-adm
manual page for
details. manta-adm genconfig --from-file
takes as input a list of physical
servers and information about each one. Large deployments that use Device 42 to
manage hardware inventory may find the
manta-genazconfig tool useful for
constructing the input for manta-adm genconfig
.
The most important production configurations are described below, but for reference, here are the principles to keep in mind:
- Storage zones should only be co-located with marlin zones, and only on storage nodes. Neither makes sense without the other, and we do not recommend combining them with other zones. All other zones should be deployed onto non-storage compute nodes.
- Nameservice: There must be an odd number of "nameservice" zones in order to achieve consensus, and there should be at least three of them to avoid a single point of failure. There must be at least one in each DC to survive any combination of datacenter partitions, and it's recommended that they be balanced across DCs as much as possible.
- For the non-sharded, non-ops-related zones (which is everything except moray, postgres, ops, madtom, marlin-dashboard), there should be at least two of each kind of zone in the entire deployment (for availability), and they should not be in the same datacenter (in order to survive a datacenter loss). For single-datacenter deployments, they should at least be on separate compute nodes.
- Only one madtom and marlin-dashboard zone is considered required. It would be good to provide more than one in separate datacenters (or at least separate compute nodes) for maintaining availability in the face of a datacenter failure.
- There should only be one ops zone. If it's unavailable for any reason, that will only temporarily affect metering, garbage collection, and reports.
- For postgres, there should be at least three instances in each shard. For multi-datacenter configurations, these instances should reside in different datacenters. For single-datacenter configurations, they should be on different compute nodes. (Postgres instances from different shards can be on the same compute node, though for performance reasons it would be better to avoid that.)
- For moray, there should be at least two instances per shard in the entire deployment, and these instances should reside on separate compute nodes (and preferably separate datacenters).
- garbage-collector zones should not be configured to poll more than 6 shards. Further, they should not be co-located with instances of other CPU-intensive Manta components (e.g. loadbalancer) to avoid interference with the data path.
Most of these constraints are required in order to maintain availability in the event of failure of any component, server, or datacenter. Below are some example configurations.
Example single-datacenter, multi-server configuration
On each storage node, you should deploy one "storage" zone. We recommend deploying 128 "marlin" zones for systems with 256GB of DRAM.
If you have N metadata shards, and assuming you'll be deploying 3 postgres instances in each shard, you'd ideally want to spread these over 3N compute nodes. If you combine instances from multiple shards on the same host, you'll defeat the point of splitting those into shards. If you combine instances from the same shard on the same host, you'll defeat the point of using replication for improved availability.
You should deploy at least two Moray instances for each shard onto separate compute nodes. The remaining services can be spread over the compute nodes in whatever way, as long as you avoid putting two of the same thing onto the same compute node. Here's an example with two shards using six compute nodes:
CN1 | CN2 | CN3 | CN4 | CN5 | CN6 |
---|---|---|---|---|---|
postgres 1 | postgres 1 | postgres 1 | postgres 2 | postgres 2 | postgres 2 |
moray 1 | moray 1 | electric-moray | moray 2 | moray 2 | electric-moray |
jobsupervisor | jobsupervisor | medusa | medusa | authcache | authcache |
nameservice | nameservice | nameservice | webapi | webapi | webapi |
ops | marlin-dash | madtom | loadbalancer | loadbalancer | loadbalancer |
jobpuller | jobpuller |
In this notation, "postgres 1" and "moray 1" refer to an instance of "postgres" or "moray" for shard 1.
Example three-datacenter configuration
All three datacenters should be in the same region, meaning that they share a reliable, low-latency, high-bandwidth network connection.
On each storage node, you should deploy one "storage" zone. We recommend deploying 128 "marlin" zones for systems with 256GB of DRAM.
As with the single-datacenter configuration, you'll want to spread the postgres instances for N shards across 3N compute nodes, but you'll also want to deploy at least one postgres instance in each datacenter. For four shards, we recommend the following in each datacenter:
CN1 | CN2 | CN3 | CN4 |
---|---|---|---|
postgres 1 | postgres 2 | postgres 3 | postgres 4 |
moray 1 | moray 2 | moray 3 | moray 4 |
nameservice | nameservice | electric-moray | authcache |
ops | jobsupervisor | jobsupervisor | webapi |
webapi | jobpuller | loadbalancer | loadbalancer |
marlin-dashboard | madtom |
In this notation, "postgres 1" and "moray 1" refer to an instance of "postgres" or "moray" for shard 1.
Other configurations
For testing purposes, it's fine to deploy all of Manta on a single system. Obviously it won't survive server failure. This is not supported for a production deployment.
It's not supported to run Manta in an even number of datacenters since there would be no way to maintain availability in the face of an even split. More specifically:
- A two-datacenter configuration is possible but cannot survive datacenter failure or partitioning. That's because the metadata tier would require synchronous replication across two datacenters, which cannot be maintained in the face of any datacenter failure or partition. If we relax the synchronous replication constraint, then data would be lost in the event of a datacenter failure, and we'd also have no way to resolve the split-brain problem where both datacenters accept conflicting writes after the partition.
- For even numbers N >= 4, we could theoretically survive datacenter failure, but any N/2 -- N/2 split would be unresolvable. You'd likely be better off dividing the same hardware into N - 1 datacenters.
It's not supported to run Manta across multiple datacenters not in the same region (i.e., not having a reliable, low-latency, high-bandwidth connection between all pairs of datacenters).
Deploying Manta
Before you get started for anything other than a COAL or lab deployment, be sure to read and fully understand the section on "Planning a Manta deployment" above.
These general instructions should work for anything from COAL to a multi-DC, multi-compute-node deployment. The general process is:
Set up Triton in each datacenter, including the headnode, all Triton services, and all compute nodes you intend to use. For easier management of hosts, we recommend that the hostname reflect the type of server and, possibly, the intended purpose of the host. For example, we use the "RA" or "RM" prefix for "Richmond-A" hosts and "MS" prefix for "Mantis Shrimp" hosts.
In the global zone of each Triton headnode, set up a manta deployment zone using:
sdcadm post-setup common-external-nics # enable downloading service images sdcadm post-setup manta --mantav1
In each datacenter, generate a Manta networking configuration file.
a. For COAL, from the GZ, use:
headnode$ /zones/$(vmadm lookup alias=manta0)/root/opt/smartdc/manta-deployment/networking/gen-coal.sh > /var/tmp/netconfig.json
b. For those using the internal Joyent Engineering lab, run this from the lab.git repo:
lab.git$ node bin/genmanta.js -r RIG_NAME LAB_NAME
and copy that to the headnode GZ.
c. For other deployments, see "Networking configuration" below.
Once you've got the networking configuration file, configure networks by running this in the global zone of each Triton headnode:
headnode$ ln -s /zones/$(vmadm lookup alias=manta0)/root/opt/smartdc/manta-deployment/networking /var/tmp/networking headnode$ cd /var/tmp/networking headnode$ ./manta-net.sh CONFIG_FILE
This step is idempotent. Note that if you are setting up a multi-DC Manta, ensure that (1) your Triton networks have cross datacenter connectivity and routing set up and (2) the Triton firewalls allow TCP and UDP traffic cross- datacenter.
For multi-datacenter deployments, you must link the datacenters within Triton so that the UFDS database is replicated across all three datacenters.
For multi-datacenter deployments, you must configure SAPI for multi-datacenter support.
If you'll be deploying a loadbalancer on any compute nodes other than a headnode, then you'll need to create the "external" NIC tag on those CNs. For common single-system configurations (for dev and test systems), you don't usually need to do anything for this step. For multi-CN configurations, you probably will need to do this. See the Triton documentation for how to add a NIC tag to a CN.
In each datacenter's manta deployment zone, run the following:
manta$ manta-init -s SIZE -e YOUR_EMAIL
manta-init
must not be run concurrently in multiple datacenters.SIZE
must be one of "coal", "lab", or "production".YOUR_EMAIL
is used to create an Amon contact for alarm notifications.This step runs various initialization steps, including downloading all of the zone images required to deploy Manta. This can take a while the first time you run it, so you may want to run it in a screen session. It's idempotent.
A common failure mode for those without quite fast internet links is a failure to import the "manta-marlin" image. The manta-marlin image is the multi-GB image that is used for zones in which Manta compute jobs run. See the "Workaround for manta-marlin image import failure" section below.
In each datacenter's manta deployment zone, deploy Manta components.
a. In COAL, just run
manta-deploy-coal
. This step is idempotent.b. For a lab machine, just run
manta-deploy-lab
. This step is idempotent.c. For any other installation (including a multi-CN installation), you'll need to run several more steps: assign shards for storage and object metadata with "manta-shardadm"; create a hash ring with "manta-adm create-topology"; generate a "manta-adm" configuration file (see "manta-adm configuration" below); and finally run "manta-adm update config.json" to deploy those zones. Your best bet is to examine the "manta-deploy-dev" script to see how it uses these tools. See "manta-adm configuration" below for details on the input file to "manta-adm update". Each of these steps is idempotent, but the shard and hash ring must be set up before deploying any zones.
If desired, set up connectivity to the "ops", "marlin-dashboard", and "madtom" zones. See "Overview of Operating Manta" below for details.
For multi-datacenter deployments, set the MUSKIE_MULTI_DC SAPI property. This is required to enforce that object writes are distributed to multiple datacenters. In the SAPI master datacenter:
headnode $ app_uuid="$(sdc-sapi /applications?name=manta | json -Ha uuid)" headnode $ echo '{ "metadata": { "MUSKIE_MULTI_DC": true } }' | \ sapiadm update "$app_uuid"
Repeat the following in each datacenter.
headnode $ manta-oneach -s webapi 'svcadm restart "*muskie*"'
If you wish to enable basic monitoring, run the following in each datacenter:
manta-adm alarm config update
to deploy Amon probes and probe groups shipped with Manta. This will cause alarms to be opened when parts of Manta are not functioning. Email notifications are enabled by default using the address provided to
manta-init
above. (Email notifications only work after you have configured the Amon service for sending email.) If you want to be notified about alarm events via XMPP, see "Changing alarm contact methods" below.In development environments with more than one storage zone on a single system, it may be useful to apply quotas to storage zones so that if the system fills up, there remains space in the storage pool to address the problem. You can do this by finding the total size of the storage pool using
zfs list zones
in the global zone:# zfs list zones NAME USED AVAIL REFER MOUNTPOINT zones 77.5G 395G 612K /zones
Determine how much you want to allow the storage zones to use. In this case, we'll allow the zones to use 100 GiB each, making up 300 GiB, or 75% of the available storage. Now, find the storage zones:
# manta-adm show storage SERVICE SH ZONENAME GZ ADMIN IP storage 1 15711409-ca77-4204-b733-1058f14997c1 172.25.10.4 storage 1 275dd052-5592-45aa-a371-5cd749dba3b1 172.25.10.4 storage 1 b6d2c71f-ec3d-497f-8b0e-25f970cb2078 172.25.10.4
and for each one, update the quota using
vmadm update
. You can apply a 100 GiB quota to all of the storage zones on a single-system Manta using:manta-adm show -H -o zonename storage | while read zonename; do vmadm update $zonename quota=100; done
Note: This only prevents Manta storage zones from using more disk space than you've budgeted for them. If the rest of the system uses more than expected, you could still run out of disk space. To avoid this, make sure that all zones have quotas and the sum of quotas does not exceed the space available on the system.
Background: Manta operators are responsible for basic monitoring of components, including monitoring disk usage to avoid components running out of disk space. Out of the box, Manta stops using storage zones that are nearly full. This mechanism relies on storage zones reporting how full they are, which they determine by dividing used space by available space. However, Manta storage zones are typically deployed without quotas, which means their available space is limited by the total space in the ZFS storage pool. This accounting is not correct when there are multiple storage zones on the same system.
To make this concrete, consider a system with 400 GiB of total ZFS pool space. Suppose there are three storage zones, each using 100 GiB of space, and suppose that the rest of the system uses negligible storage space. In this case, there are 300 GiB in use overall, so there's 100 GiB available in the pool. As a result, each zone reports that it's using 100 GiB and has 100 GiB available, so it's 50% full. In reality, though, the system is 75% full. Each zone reports that it has 100 GiB free, but if we were to write just 33 GiB to each zone, the whole system would be full.
This problem only affects deployments that place multiple storage zones on the same system, which is not typical outside of development. In development, the problem can be worked around by applying appropriate quotas in each zone (as described above).
Post-Deployment Steps
Once the above steps have been completed, there are a few steps you should consider doing to ensure a working deployment.
Prerequisites
If you haven't already done so, you will need to install the Manta CLI tools.
Set up a Manta Account
To test Manta with the Manta CLI tools, you will need an account
configured in Triton. You can either use one of the default configured
accounts or setup your own. The most common method is to test using the
poseidon
account which is created by the Manta install.
In either case, you will need access to the Operations Portal. See the instructions here on how to find the IP address of the Operations Portal from your headnode.
Log into the Operations Portal:
- COAL users should use login
admin
and the password you initially setup. - Lab users will also use
admin
, but need to ask whoever provisioned your lab account for the password.
Once in, follow these instructions to add ssh keys to the account of your choice.
Test Manta from the CLI Tools
Once you have setup an account on Manta or added your ssh keys added to an existing account, you can test your Manta install with the Manta CLI tools you installed above in "Prerequisites".
There are complete instructions on how to get started with the CLI tools on the apidocs page.
Some things in that guide will not be as clear for users of custom deployments.
The biggest difference will be the setting of the
MANTA_URL
variable. You will need to find the IP address of your API endpoint. To do this from your headnode:headnode$ manta-adm show -H -o primary_ip loadbalancer
Multiple addresses will be returned. Choose any one and set
MANTA_URL
tohttps://$that_ip
.MANTA_USER
will be the account you setup in "Set up a Manta Account" section.MANTA_KEY_ID
will be the ssh key id you added in "Set up a Manta Account" section.- If the key you used is in an environment that has not installed a
certificate signed by a recognized authority you might see
Error: self signed certificate
errors. To fix this, addMANTA_TLS_INSECURE=true
to your environment or shell config.
A final ~/.bashrc
or ~/.bash_profile
might look something like:
export MANTA_USER=poseidon
export MANTA_URL=https://<your-loadbalancer-ip>
export MANTA_TLS_INSECURE=true
export MANTA_KEY_ID=`ssh-keygen -l -f ~/.ssh/id_rsa.pub | awk '{print $2}' | tr -d '\n'`
Lastly test the CLI tools from your development machine:
echo "Hello, Manta" > /tmp/hello.txt
$ mput -f /tmp/hello.txt ~~/stor/hello-foo
.../stor/hello-foo [=======================================================>] 100% 13B
$ mls ~~/stor/
hello-foo
$ mget ~~/stor/hello-foo
Hello, Manta
Deploy Accelerated Garbage Collection Components
While the manta-init
deployment script creates the SAPI garbage-collector
service, none of the default deployment layouts include any garbage-collector
instances. The accelerated gc functionality is intended to be an extension to
Manta, so it is deployed and managed with a separate manta-adm
mode after the
core Manta components are deployed.
Verify objects have no snaplinks
Accelerated garbage-collection can only be used on objects that have no
snaplinks. Part of the deployment sequence involves disabling snaplinks for a
given user that owns the objects to be deleted. In order to prevent dangling
metadata references, it is important first verify that the user does not own
any snaplinked objects. Manta does not have tools to run this check, but one
method for doing it might be to scan the Manta table on each shard primary to
generate a mapping from objectid
to _key
and search for collisions.
Get the latest garbage-collector zone image
headnode$ updates-imgadm import name=manta-garbage-collector --latest
Enable Accelerated Garbage-collection (Disable snaplinks)
In order to leverage accelerated garbage-collection, there must be at least one snaplink-disabled user in the Manta deployment. Snaplinks can be disabled using the following command:
headnode$ manta-adm accel-gc enable <ACCOUNT-LOGIN>
To list the accounts for which accelerated garbage-collection is enabled run:
headnode$ manta-adm accel-gc accounts
To disable accelerated garbage-collection (re-enabling snaplinks) for an account:
headnode$ manta-adm accel-gc disable <ACCOUNT-LOGIN>
Since the snaplink-disabled bit for each account is stored as SAPI application metadata, enabling/disabling snaplinks requires restarting all Muskies in the Manta deployment:
headnode$ manta-oneach -s webapi "svcadm restart
svc:/manta/application/muskie:muskie-*"
It is also necessary to restart garbage-collectors for the same reason.
headnode$ manta-oneach -s garbage-collector
"svcadm restart garbage-collector"
After the restarts are complete any requests to snaplink objects owned by
<ACCOUNT-LOGIN>
will fail with a 403 error, and all successful requests to delete
objects created and/or owned by the snaplink-disabled account will result in new
records added to the manta_fastdelete_queue
(and not the manta_delete_log
).
To summarize, objects owned by a snaplink-disabled account will not be garbage-collected until:
- Shards storing those objects are assigned to some garbage-collector
- The account has been marked snaplink-disabled, and that bit of configuration is picked up by all the Muskies and Garbage-collectors in the delpoyment.
A simple check that the accelerated GC pipeline is working can be done by
logging into an index shard and continuously monitoring the size of the
manta_fastdelete_queue
while issuing requests to delete objects owned by the
snaplink-disabled account. Depending on the batch size configuration of the
garbage-collectors in the local Manta deployment, it could take roughly 30
seconds for records inserted into the queue to be removed, but the queue
should always eventually be cleared.
For more sophisticated progress monitoring, see the node-artedi probes described in the garbage-collector readme.
Deploy garbage-collector zones
garbage-collector instances are deployed just like any other Manta service: by
including them in the service layout configuration and then passing the config to
manta-adm update
. The manta-adm accel-gc
mode includes its own genconfig-like
functionality that layers any number of garbage-collector instances onto the
current deployment configuration. To generate a configuration with N
garbage-collectors, run:
headnode$ IMAGEUUID=$(sdc-imgadm list -H -o uuid name=manta-garbage-collector --latest)
headnode$ manta-adm accel-gc genconfig $IMAGEUUID N &> config-with-gc.json
manta-adm accel-gc genconfig
functions similarly to manta-adm genconfig
which
print a json-formatted deployment layout. Like manta-adm genconfig
, the 'gc'
variant also enforces a set of criteria for choosing which compute nodes to add
garbage-collector instance to:
manta-adm accel-gc
will avoid co-locating garbage-collector zones with either loadbalancer zones or nameservice zones. For delete-heavy workloads, garbage-collector instances will generally use more CPU and memory resources. Separating theses process from system-critical services is a precaution against catastrophic service degradation.manta-adm accel-gc
will evenly distribute the garbage-collector zones among the CNs with least number of deployed instances that also meet the first criterion
If the above constraints cannot be met in a deployment (this will likely be
the case for most non-production deployments), the operator may choose to ignore
them with the --ignore-criteria
or -i
switch:
headnode$ manta-adm accel-gc genconfig -i $IMAGEUUID N &> config-with-gc.json
Once you are happy with configuration, run:
headnode$ manta-adm update config-with-gc.json
to deploy the new zones.
Verify garbage-collectors are running
Each garbage-collector instance runs an administration server that can be used to extract information about its configuration. A good check to run to ensure that the previous step went well is:
headnode$ manta-oneach -s garbage-collector \
"curl -X GET localhost:2020/shards"
Here is an example of what the output of the previous command might look like in a deployment with two garbage-collectors:
SERVICE ZONE OUTPUT
garbage-collector 2bd87578 []
garbage-collector 756e17e4 []
The output indicates that the collectors are healthy, but they haven't been tasked with processing records from any shards yet.
Assign shards to collectors
By default, garbage-collectors come up idle because they are not configured to read records from any metadata shards. The configuration that indicates which collector should process records from which shard is stored in each collector's SAPI instance object. The benefit of storing this mapping in each instance object is that the configuration survives reprovisions and can be managed with the existing SAPI interface.
Each garbage-collector instance object stores a list of index shard identifiers
in a metadata array called GC_ASSIGNED_SHARDS
. This array can be modified by
hand with tools like sapiadm
and sdc-sapi
, but it is simpler to manage this
configuration with manta-adm accel-gc
. Once the collectors have been deployed,
run:
headnode$ manta-adm accel-gc gen-shard-assignment &> gc-shard-assignment.json
to generate a mapping from garbage-collector instances to index shards. The
operation will distribute all of the index shards in the Manta deployment
to the garbage-collectors as evenly as possible. An example of how such a
configuration would look on a deployment with two index shards is:
{
"756e17e4-bfd2-4bc5-b3b6-166480dd0614": {
"GC_ASSIGNED_SHARDS": [
{
"host": "2.moray.orbit.example.com",
"last": true
}
]
},
"2bd87578-285f-4937-aff1-181a7f32dcc0": {
"GC_ASSIGNED_SHARDS": [
{
"host": "1.moray.orbit.example.com",
"last": true
}
]
}
}
Note that data in the GC_ASSIGNED_SHARDS
array comes from the SAPI
Manta application's INDEX_MORAY_SHARDS
metadata field.
The keys of the object are uuids of garbage-collector instances, and the values
are changes that will be applied to the metadata
blob of the corresponding
instance's SAPI object. The last object in the GC_ASSIGNED_SHARDS
array must
have a "last" field set to true. This is a convention used by Manta's templating
engine.
Update garbage-collector metadata
Once you've generated a mapping from collectors to shards and saved it in
gc-shard-assignment.json
, run:
headnode$ manta-adm accel-gc update gc-shard-assignment.json
to update the corresponding SAPI metadata. There are a few points to stress here:
- This operation replaces any existing mapping from garbage-collectors
to shards. This behavior makes the assignment idempotent, which mimics the
semantics of
manta-adm update
. - Running this operation does not immediately cause the garbage-collectors to start reading records from the newly assigned shards. That requires restarting all the modified collectors.
If new shards or new garbage-collectors are added to the Manta deployment,
you may run manta-adm accel-gc gen-shard-assignment
followed by manta-adm
accel-gc update
to re-assign the new pool of shards to the new pool of
collectors.
Restart garbage-collectors
In order for the configuration change in the previous step to take effect, you will need to restart the garbage-collectors. This can be done with the following manta-oneach query:
headnode$ manta-oneach -s garbage-collector
"svcadm restart config-agent; sleep 5; svcadm restart garbage-collector"
Restarting the config-agent ensures that the changes have been picked up and that the local process configuration file has been re-rendered. After the garbage-collectors have been restarted, you can verify the shard assignment took effect with:
headnode$ manta-oneach -s garbage-collector "curl -X GET localhost:2020/shards"
Which should now show the following output:
SERVICE ZONE OUTPUT
garbage-collector 2bd87578 [{"host":"1.moray.orbit.example.com"}]
garbage-collector 756e17e4 [{"host":"2.moray.orbit.example.com"}]
Networking configuration
The networking configuration file is a per-datacenter JSON file with several properties:
Property | Kind | Description |
---|---|---|
azs |
array of strings | list of all availability zones (datacenters) participating in Manta in this region |
this_az |
string | string (in azs ) denoting this availability zone |
manta_nodes |
array of strings | list of server uuid's for all servers participating in Manta in this AZ |
marlin_nodes |
array of strings | list of server uuid's (subset of manta_nodes ) that are storage nodes |
admin |
object | describes the "admin" network in this datacenter (see below) |
manta |
object | describes the "manta" network in this datacenter (see below) |
marlin |
object | describes the "marlin" network in this datacenter (see below) |
nic_mappings |
object | maps each server in manta_nodes to an object mapping each network name ("manta" and "marlin") to the network interface on the server that should be tagged |
mac_mappings |
object | (deprecated) maps each server uuid from manta_nodes to an object mapping each network name ("admin", "manta", and "marlin") to the MAC address on that server over which that network should be created. |
distribute_svcs |
boolean | control switch over boot-time networking detection performed by manta-net.sh (see below) |
"admin", "manta", and "marlin" all describe these networks that are built into Manta:
admin
: the Triton administrative networkmanta
: the Manta administrative network, used for high-volume communication between all Manta services.marlin
: the network used for compute zones. This is usually a network that gives out private IPs that are NAT'd to the internet so that users can contact the internet from Marlin jobs, but without needing their own public IP for each zone.
Each of these is an object with several properties:
Property | Kind | Description |
---|---|---|
network |
string | Name for the Triton network object (usually the same as the network name) |
nic_tag |
string | NIC tag name for this network (usually the same as the network name) |
Besides those two, each of these blocks has a property for the current availability zone that describes the "subnet", "gateway", "vlan_id", and "start" and "end" provisionable addresses.
nic_mappings
is a nested object structure defining the network interface to be
tagged for each server defined in manta_nodes
, and for each of Manta's
required networks. See below for an example of this section of the
configuration.
Note: If aggregations are used, they must already exist in NAPI, and updating NIC tags on aggregations will require a reboot of the server in question.
The optional boolean distribute_svcs
gives control to the operator over the
boot-time networking detection that happens each time manta-net.sh
is executed
(which determines if the global zone SMF services should be distributed). For
example, an operator has enabled boot-time networking in a datacenter _after_
installing Manta, and subsequently would like to add some more storage nodes.
For consistency, the operator can set distribute_svcs
to true
in order to
force distribution of these global zone services.
Note: For global zone network changes handled by boot-time networking to take effect, a reboot of the node must be performed. See Triton's virtual networking documentation for more information on boot-time networking.
For reference, here's an example multi-datacenter configuration with one service node (aac3c402-3047-11e3-b451-002590c57864) and one storage node (445aab6c-3048-11e3-9816-002590c3f3bc):
{
"this_az": "staging-1",
"manta_nodes": [
"aac3c402-3047-11e3-b451-002590c57864",
"445aab6c-3048-11e3-9816-002590c3f3bc"
],
"marlin_nodes": [
"445aab6c-3048-11e3-9816-002590c3f3bc"
],
"azs": [
"staging-1",
"staging-2",
"staging-3"
],
"admin": {
"nic_tag": "admin",
"network": "admin",
"staging-1": {
"subnet": "172.25.3.0/24",
"gateway": "172.25.3.1"
},
"staging-2": {
"subnet": "172.25.4.0/24",
"gateway": "172.25.4.1"
},
"staging-3": {
"subnet": "172.25.5.0/24",
"gateway": "172.25.5.1"
}
},
"manta": {
"nic_tag": "manta",
"network": "manta",
"staging-1": {
"vlan_id": 3603,
"subnet": "172.27.3.0/24",
"start": "172.27.3.4",
"end": "172.27.3.254",
"gateway": "172.27.3.1"
},
"staging-2": {
"vlan_id": 3604,
"subnet": "172.27.4.0/24",
"start": "172.27.4.4",
"end": "172.27.4.254",
"gateway": "172.27.4.1"
},
"staging-3": {
"vlan_id": 3605,
"subnet": "172.27.5.0/24",
"start": "172.27.5.4",
"end": "172.27.5.254",
"gateway": "172.27.5.1"
}
},
"marlin": {
"nic_tag": "mantanat",
"network": "mantanat",
"staging-1": {
"vlan_id": 3903,
"subnet": "172.28.64.0/19",
"start": "172.28.64.4",
"end": "172.28.95.254",
"gateway": "172.28.64.1"
},
"staging-2": {
"vlan_id": 3904,
"subnet": "172.28.96.0/19",
"start": "172.28.96.4",
"end": "172.28.127.254",
"gateway": "172.28.96.1"
},
"staging-3": {
"vlan_id": 3905,
"subnet": "172.28.128.0/19",
"start": "172.28.128.4",
"end": "172.28.159.254",
"gateway": "172.28.128.1"
}
},
"nic_mappings": {
"aac3c402-3047-11e3-b451-002590c57864": {
"manta": {
"mac": "90:e2:ba:4b:ec:d1"
}
},
"445aab6c-3048-11e3-9816-002590c3f3bc": {
"manta": {
"mac": "90:e2:ba:4a:32:71"
},
"mantanat": {
"aggr": "aggr0"
}
}
}
The deprecated mac_mappings
can also be used in place of nic_mappings
. Only
one of nic_mappings
or mac_mappings
is supported per network configuration
file.
In a multi-datacenter configuration, this would be used to configure the "staging-1" datacenter. There would be two more configuration files, one for "staging-2" and one for "staging-3".
Workaround for manta-marlin image import failure
A common failure mode with manta-init ...
for those without a fast internet
link is a failure to import the large "manta-marlin" image. This is a multi-GB
image used for the zones in which Manta compute jobs run. The problem is that
the large image can make it easy to hit the one hour timeout for the
IMGAPI AdminImportRemoteImage
endpoint used to import Manta images. Neither this endpoint nor the
https://updates.joyent.com server hosting the images supports resumable
downloads.
Here is a manual workaround (run the following from the headnode global zone):
cd /var/tmp
# Determine the UUID of the latest "manta-marlin" image on updates.joyent.com.
muuid=$(updates-imgadm list name=manta-marlin --latest -H -o uuid)
# Download directly from a separate manual download area in Manta.
curl -kO https://us-east.manta.joyent.com/Joyent_Dev/public/Manta/manta-marlin-image/$muuid.imgmanifest
# First ensure that the origin (i.e. parent) image is installed
origin=$(json -f $muuid.imgmanifest origin)
[[ -z "$origin" ]] \
|| sdc-imgadm get $origin >/dev/null \
|| sdc-imgadm import $origin -S https://updates.joyent.com
# If that failed, then the separate download area doesn't have a recent
# image. Please log an issue.
[[ $? -ne 0 ]] && echo log an issue at https://github.com/joyent/manta/issues/
# If the following is interrupted, then re-run the same command to resume:
curl -kO -C - https://us-east.manta.joyent.com/Joyent_Dev/public/Manta/manta-marlin-image/$muuid.file.gz
# Verify the download checksum
[[ $(json -f $muuid.imgmanifest | json files.0.sha1) \
== $(openssl dgst -sha1 $muuid.file.gz | awk '{print $2}') ]] \
|| echo "error downloading, please delete and retry"
# Then install this image into the DC's IMGAPI:
sdc-imgadm import -m $muuid.imgmanifest -f $muuid.file.gz
manta-adm configuration
"manta-adm" is the tool we use both to deploy all of the Manta zones and then to provision new zones, deprovision old zones, or reprovision old zones with a new image. "manta-adm" also has commands for viewing what's deployed, showing information about compute nodes, and more, but this section only discusses the configuration file format.
A manta-adm configuration file takes the form:
{
"COMPUTE_NODE_UUID": {
"SERVICE_NAME": {
"IMAGE_UUID": COUNT_OF_ZONES
},
"SHARDED_SERVICE_NAME": {
"SHARD_NUMBER": {
"IMAGE_UUID": COUNT_OF_ZONES
},
}
},
}
The file specifies how many of each kind of zone should be deployed on each compute node. For most zones, the "kind" of zone is just the service name (e.g., "storage"). For sharded zones, you also have to specify the shard number.
After you've run manta-init
, you can generate a sample configuration for a
single-system install using "manta-adm genconfig". Use that to give you an
idea of what this looks like:
manta-adm genconfig coal
{
"<any>": {
"nameservice": {
"197e905a-d15d-11e3-90e2-6bf8f0ea92b3": 1
},
"postgres": {
"1": {
"92782f28-d236-11e3-9e6c-5f7613a4df37": 2
}
},
"moray": {
"1": {
"ef659002-d15c-11e3-a5f6-4bf577839d16": 1
}
},
"electric-moray": {
"e1043ddc-ca82-11e3-950a-ff14d493eebf": 1
},
"storage": {
"2306b44a-d15d-11e3-8f87-6b9768efe5ae": 2
},
"authcache": {
"5dff63a4-d15c-11e3-a312-5f3ea4981729": 1
},
"webapi": {
"319afbfa-d15e-11e3-9aa9-33ebf012af8f": 1
},
"loadbalancer": {
"7aac4c88-d15c-11e3-9ea6-dff0b07f5db1": 1
},
"jobsupervisor": {
"7cf43bb2-d16c-11e3-b157-cb0adb200998": 1
},
"jobpuller": {
"1b0f00e4-ca9b-11e3-ba7f-8723c9cd3ce7": 1
},
"medusa": {
"bb6e5424-d0bb-11e3-8527-676eccc2a50a": 1
},
"ops": {
"ab253aae-d15d-11e3-8f58-3fb986ce12b3": 1
},
"marlin": {
"1c18ae6e-cf70-473a-a22c-f3536d6ea789": 2
}
}
}
This file effectively specifies all of the Manta components except for the platforms and Marlin agents.
You can generate a configuration file that describes your current deployment
with manta-adm show -s -j
.
For a coal or lab deployment, your best bet is to save the output of manta-adm
genconfig coal
or manta-adm genconfig lab
to a file and use that. This is
what the manta-deploy-coal
and manta-deploy-lab
scripts do, and you may as
well just use those.
Once you have a file like this, you can pass it to manta-adm update
, which
will show you what it will do in order to make the deployment match the
configuration file, and then it will go ahead and do it. For more information,
see "manta-adm help update".
Upgrading Manta components
Manta services upgrades
There are two distinct methods of updating instances: you may deploy additional instances, or you may reprovision existing instances.
With the first method (new instances), additional instances are provisioned using a newer image. This approach allows you to add additional capacity without disrupting extant instances, and may prove useful when an operator needs to validate a new version of a service before adding it to the fleet.
With the second method (reprovision), this update will swap one image out for a newer image, while preserving any data in the instance's delegated dataset. Any data or customizations in the instance's main dataset, i.e. zones/UUID, will be lost. Services which have persistent state (manatee, mako, redis) must use this method to avoid discarding their data. This update moves the service offline for 15-30 seconds. If the image onto which an image is reprovisioned doesn't work, the instance can be reprovisioned back to its original image.
This procedure uses "manta-adm" to do the upgrade, which uses the reprovisioning method for all zones other than the "marlin" zones.
Prerequisites
Figure out which image you want to install. You can list available images by running updates-imgadm:
headnode$ updates-imgadm list name=manta-jobsupervisor | tail
Replace manta-jobsupervisor with some other image name, or leave it off to see all images. Typically you'll want the most recent one. Note the uuid of the image in the first column.
Figure out which zones you want to reprovision. In the headnode GZ of a given datacenter, you can enumerate the zones and versions for a given manta_role using:
headnode$ manta-adm show jobsupervisor
You'll want to note the VM UUIDs for the instances you want to update.
Procedure
Run this in each datacenter:
Download updated images. The supported approach is to re-run the
manta-init
command that you used when initially deploying Manta inside the manta-deployment zone. For us-east, use:manta-init -e manta+us-east@joyent.com -s production -c 10
Do not run
manta-init
concurrently in multiple datacenters.Inside the Manta deployment zone, generate a configuration file representing the current deployment state:
manta-adm show -s -j > config.json
Modify the file as desired. See "manta-adm configuration" above for details on the format. In most cases, you just need to change the image uuid for the service that you're updating. You can get the latest image for a service with the following command:
sdc-sapi "/services?name=[service name]&include_master=true" | \ json -Ha params.image_uuid
Pass the updated file to
manta-adm update
:manta-adm update config.json
Do not run
manta-adm update
concurrently in multiple datacenters.Update the alarm configuration as needed. See "Amon Alarm Updates" below for details.
Marlin agent upgrades
Run this procedure for each datacenter whose Marlin agents you want to upgrade.
Find the build you want to use using
updates-imgadm
in the global-zone of the headnode.headnode$ updates-imgadm list name=marlin
Fetch the desired tarball to /var/tmp on the headnode. The file will be named
<UUID>-file.gz
.headnode$ uuid=<UUID> headnode$ cd /var/tmp headnode$ updates-imgadm get-file -O "$uuid"
Copy the tarball to each of the storage nodes:
headnode$ manta-oneach -G -s storage \ -d /var/tmp -g "/var/tmp/${uuid}-file.gz"
Apply the update to all shrimps with:
headnode$ manta-oneach -G -s storage \ "/opt/smartdc/agents/bin/apm install /var/tmp/${uuid}-file.gz"
Verify that agents are online with:
headnode$ manta-oneach -G -s storage 'svcs marlin-agent'
Make sure most of the compute zones become ready. For this, you can use the dashboard or run this periodically:
headnode$ manta-oneach -G -s storage mrzones
Note: The "apm install" operation will restart the marlin-agent service, which has the impact of aborting any currently-running tasks on that system and causing them to be retried elsewhere. They will be retried up to twice, and Marlin will avoid retrying in the same AZ if possible. (Of course, if you're not careful, it's possible to update the agents in a way that causes multiple retries for the same tasks, but as long as you don't bounce each agent more than once, this alone should not induce errors.)
Compute zone ("marlin" zone) updates
Compute zones are a little different than most of the other Manta components because they don't directly run a software service. Instead, these are the zones where users' compute jobs run. For users' convenience, these zones typically contain a large amount of software preinstalled from pkgsrc. The main reason to update these zones is to upgrade that package set to a newer base image, giving users access to newer versions of all the preinstalled software.
Manta supports multiple different versions of the compute zone image being available to end users simultaneously. One image is configured as the default. End users can request other available images on a per-job-phase basis. While user documentation recommends that users always specify which image they want to use, most users do not use this option, so most jobs end up using the default image.
Because the software in compute zones is directly exposed to end users, updates to these zones typically need to be coordinated with end users. Different operators may have different needs:
- Public cloud operators may want to roll out a new image and make it available to end users for a while _without_ making that new image the default image. This allows bleeding-edge customers to experiment with the new image and provide feedback. After promoting the new image to the default, operators may also want the old image to remain available for a while to allow slower customers to migrate on their own time (within some window).
- In deployments where operators and users are more tightly-coupled, operators may elect to avoid these grace periods and just update the default to the new image immediately.
In order to support these use-cases, the compute zone update process is a multi-stage approach. The approach allows both operators and end users to validate each step in order to avoid having to rollback. But in the event that a serious issue goes undetected, the upgrade can also be rolled back quickly. The update process works broadly as follows:
- The operator uses the "manta-adm" tool to deploy a large number of compute zones using the new image to each storage node. Because there can be hundreds of compute zones in even modest Manta deployments, it can take many minutes (even hours or days, depending on the size of the deployment) to deploy all the new zones. Older compute zones are not affected by the deployment of newer zones, and the newer zones are not used at this point because the default image has not been changed.
- If the operator wants to make the new zones available to end users at this point without making the new image the default, then they will likely need to update the configuration of the webapi zones. (The webapi maintains its own configuration of supported images to allow operators to limit which zones are available at any given time.) This step is not necessary if users don't intend to request the new image explicitly, but this does allow both operators and users to validate the new image before committing to it for new jobs.
- When ready to make the new image the default for all new jobs, the operator modifies the Marlin agent configuration. At this point, all new jobs that don't request a specific image will start using the new image. Users can continue using the older image by explicitly requesting it.
- When the operator is ready to stop supporting the older image, they can use the "manta-adm" tool to remove all instances of zones using the older image.
At any point before the old zones are deprovisioned, the upgrade can be rolled back by simply changing the default image back.
Compute zone update procedure
The above procedure outline really only involves a few kinds of steps:
- using "manta-adm" to provision or deprovision compute zones,
- updating the Marlin agent configuration to change the default zone image, and
- updating the webapi configuration to change the available zone images.
Let's consider a specific example, where we're updating a system from compute
zone image 1757ab74-b3ed-11e2-b40f-c7adac046f18
to compute zone image
bb9264e2-f134-11e3-9ec7-478da02d1a13
:
- Import the new compute zone image into the datacenter. If upgrading to the
current image used for new Manta deployments, "manta-init" can be used to
download and import the new image. Otherwise, import it explicitly with
"sdc-imgadm import", as in
sdc-imgadm import bb9264e2-f134-11e3-9ec7-478da02d1a13 -S https://updates.joyent.com
. Use
manta-adm show -s -j > config.json
to generate a configuration file describing the zones currently deployed in the datacenter. This file should have a number of "marlin" blocks that look like this:"marlin": { "1757ab74-b3ed-11e2-b40f-c7adac046f18": 128 },
This example reflects that there are 128 compute zones using the older image on that storage node. There will be one of these blocks for each storage node.
Update the configuration file: for each of these "marlin" blocks, add a second entry for the new image. We suggest making the number of new zones match the number of old zones. (There will be twice as many zones on each server, but only half of them will generally be used.) These blocks will thus look like this:
"marlin": { "1757ab74-b3ed-11e2-b40f-c7adac046f18": 128, "bb9264e2-f134-11e3-9ec7-478da02d1a13": 128 },
You could also use a 50/50 split (e.g., 64 old zones and 64 new zones), or nearly any other combination, as long as there are a sufficient number of both old and new zones to handle the normal workload.
- Run
manta-adm update config.json
to apply these changes. In our example, this will deploy 128 compute zones to each storage node using the new image. This may take a while. - If the operator is electing to make the new image available via the API
before promoting that image to the default, then modify the "images" property
of the file
"/opt/smartdc/muskie/node_modules/marlin/jobsupervisor/etc/config.coal.json"
inside each webapi zone. Note that this change will need to be reapplied if
the webapi zone is updated or if new webapi zones are deployed. At this
point, end users can use the new image, but only by specifying the
--image
property tomjob create
. - When the operator is ready to promote the new image to the default image for new jobs, modify the "zoneDefaultImage" property in the file "/opt/smartdc/marlin/etc/agentconfig.json" and restart the marlin agent. This needs to be done on all storage nodes. Otherwise, user jobs may run in a combination of older and newer images, which can lead to surprising and incorrect results. If at any point you want to roll back this upgrade, simply set the "zoneDefaultImage" back to the previous value and restart the agents again.
When the operator is confident they don't need the old image any more, modify the "manta-adm" configuration file to remove the old image entirely, then use "manta-adm update" to apply that. In our example, the "marlin" blocks will now look like this:
"marlin": { "bb9264e2-f134-11e3-9ec7-478da02d1a13": 128 },
This procedure could be streamlined with feature requests MANTA-2778 and MANTA-2779.
Note: the "manta-adm" tool takes care of internal constraints, including the fact that compute zones cannot be reprovisioned. (Instead, new zones are provisioned and older ones are deprovisioned.)
Manta deployment zone upgrades
Since the Manta deployment zone is actually a Triton component, use sdcadm
to
update it:
headnode$ sdcadm self-update --latest
headnode$ sdcadm update manta
Amon Alarm Updates
Manta's Amon probes are managed using the manta-adm alarm
subcommand. The set
of configured probes and probe groups needs to be updated whenever the set of
probes delivered with manta-adm
itself changes (e.g., if new probes were
added, or bugs were fixed in existing probes) or when new components are
deployed or old components are removed. In all cases, it's strongly
recommended to address and close any open alarms. If the update process
removes a probe group, any alarms associated with that probe group will remain,
but without much information about the underlying problem.
To update the set of probes and probe groups deployed, use:
headnode$ sdc-login manta
manta$ manta-adm alarm config update
This command is idempotent.
Triton zone and agent upgrades
Triton zones and agents are upgraded exactly as they are in non-Manta installs.
Note that the Triton agents include the Marlin agent. If you don't want to update the Marlin agent with the Triton agents, you'll need to manually exclude it.
Platform upgrades
Platform updates for compute nodes (including the headnode) are exactly the same
as for any other Triton compute node. Use the sdcadm platform
command to
download platform images and assign them to compute nodes.
Platform updates require rebooting CNs. Note that:
- Rebooting the system hosting the ZooKeeper leader will trigger a new leader election. This should have minimal impact on service.
- Rebooting the primary peer in any Manatee shard will trigger a Manatee takeover. Write service will be lost for a minute or two while this happens.
- Other than the above constraints, you may reboot any number of nodes within a single AZ at the same time, since Manta survives loss of an entire AZ. If you reboot more than one CN from different AZs at the same time, you may lose availability of some services or objects.
SSL Certificate Updates
The certificates used for the front door TLS terminators can be updated.
Verify your PEM file. Your PEM file should contain the private key and the certificate chain, including your leaf certificate. It should be in the format:
-----BEGIN RSA PRIVATE KEY----- [Base64 Encoded Private Key] -----END RSA PRIVATE KEY----- -----BEGIN CERTIFICATE----- [Base64 Encoded Certificate] -----END CERTIFICATE----- -----BEGIN DH PARAMETERS----- [Base64 Encoded dhparams] -----END DH PARAMETERS-----
You may need to include the certificate chain in the PEM file. The chain should be a series of CERTIFICATE sections, each section having been signed by the next CERTIFICATE. In other words, the PEM file should be ordered by the PRIVATE KEY, the leaf certificate, zero or more intermediate certificates, the root certificate, and then DH parameters as the very last section.
To generate the DH parameters section, use the command:
openssl dhparam <bits> >> ssl_cert.pem
Replace
<bits>
with at least the same number of bits as are in your RSA private key (if you are unsure, 2048 is probably safe).Take a backup of your current certificate, just in case anything goes wrong.
headnode$ sdc-sapi /services?name=loadbalancer | \ json -Ha metadata.SSL_CERTIFICATE \ >/var/tmp/manta_ssl_cert_backup.pem headnode$ mv /var/tmp/manta_ssl_cert_backup.pem \ /zones/$(vmadm lookup alias=~manta)/root/var/tmp/.
Copy your certificate to the Manta zone after getting your certificate on your headnode:
headnode$ mv /var/tmp/ssl_cert.pem \ /zones/$(vmadm lookup alias=~manta)/root/var/tmp/.
Replace your certificate in the loadbalancer application. Log into the manta zone:
headnode$ sdc-login manta manta$ /opt/smartdc/manta-deployment/cmd/manta-replace-cert.js \ /var/tmp/ssl_cert.pem
Restart your loadbalancers:
# Verify your new certificate is in place headnode$ manta-oneach -s loadbalancer 'cat /opt/smartdc/muppet/etc/ssl.pem` # Restart stud headnode$ manta-oneach -s loadbalancer 'svcadm restart stud' # Verify no errors in the log headnode$ manta-oneach -s loadbalancer 'cat `svcs -L stud`' # Verify the loadbalancer is serving the new certificate headnode$ manta-oneach -s loadbalancer \ 'echo QUIT | openssl s_client -host 127.0.0.1 -port 443 -showcerts'
An invalid certificate will result in an error like this in the stud logs:
[ Jun 20 18:01:18 Executing start method ("/opt/local/bin/stud --config=/opt/local/etc/stud.conf"). ] 92728:error:0906D06C:PEM routines:PEM_read_bio:no start line:pem_lib.c:648:Expecting: TRUSTED CERTIFICATE 92728:error:140DC009:SSL routines:SSL_CTX_use_certificate_chain_file:PEM lib:ssl_rsa.c:729: [ Jun 20 18:01:18 Method "start" exited with status 1. ]
Changing alarm contact methods
The contacts that are notified for new alarm events are configured using SAPI metadata on the "manta" service within the "sdc" application (_not_ the "manta" application). This metadata identifies one or more contacts already configured within Amon. See the Amon docs for how to configure these contacts.
For historical reasons, high-severity notifications are delivered to the list of contacts called "MANTAMON_ALERT". Other notifications are delivered to the list of contacts called "MANTAMON_INFO".
Here is an example update to send "alert" level notifications to both an email address and an XMPP endpoint and have "info" level notifications sent just to XMPP:
headnode$ echo '{
"metadata": {
"MANTAMON_ALERT": [
{ "contact": "email" },
{ "contact": "mantaxmpp", "last": true }
],
"MANTAMON_INFO": [
{ "contact": "mantaxmpp", "last": true }
]
}
}' | sapiadm update $(sdc-sapi /services?name=manta | json -Ha uuid)
Note that the last object of the list must have the "last": true
key/value.
You will need to update the alarm configuration for this change to take effect. See "Amon Alarm Updates".
Overview of Operating Manta
Alarms
Manta integrates with Amon, the Triton alarming and monitoring system, to notify operators when something is wrong with a Manta deployment. It's recommended to review Amon basics in the Amon documentation.
The manta-adm
tool ships with configuration files that specify Amon probes and
probe groups, referred to elsewhere as the "Amon configuration" for Manta. This
configuration specifies which checks to run, on what period, how failures should
be processed to open alarms (which generate notifications), and how these alarms
should be organized. Manta includes built-in checks for events like components
dumping core, logging serious errors, and other kinds of known issues.
Typically, the only step that operators need to take to manage the Amon configuration is to run:
manta-adm alarm config update
after initial setup and after other deployment operations. See "Amon Alarm Updates" for more information.
With alarms configured, you can use the manta-adm alarm show
subcommand and
related subcommands to view information about open alarms. When a problem is
resolved, you can use manta-adm alarm close
to close it. You can also disable
notifications for alarms using manta-adm alarm notify
(e.g., when you do not
need more notifications about a known issue).
See the manta-adm
manual page for more information.
Madtom dashboard (service health)
Madtom is a dashboard that presents the state of all Manta components in a region-wide deployment. You can access the Madtom dashboard by pointing a web browser to port 80 at the IP address of the "madtom" zone that's deployed with Manta. For the JPC deployment, this is usually accessed through an ssh tunnel to the corresponding headnode.
Marlin dashboard (compute activity)
The Marlin dashboard shows the state of all supervisors and agents and the last time each was restarted; the state of all compute zones, which gives a sense of overall system health and utilization; and information about jobs, groups, and task streams, which represent all the work in the system. That includes both work that's currently executing and work that's queued up to execute.
You can access the Marlin dashboard by pointing a web browser to port 80 on the IP address of the "marlin-dashboard" zone that's deployed with Manta. For the JPC deployment, this is usually accessed through an ssh tunnel to the corresponding headnode.
Marlin tools
Marlin has a few tools to help understand what's going on with a compute job:
mrjob
: list jobs and fetch details about specific jobsmrerrors
: list errors from recently-executed jobsmrgroups
: list activity on a storage node (must be run on that storage node)mrzones
: list zones on a storage node (must be run on that storage node)mrextractjob
: extracts information about a job that completed over 24 hours ago from a manatee database dump.
You can run "mrjob" and "mrerrors" directly from the "ops" zone. "mrgroups" and "mrzones" should be run from an individual storage node. There's a lot more information about using these tools under the various "Debugging Marlin" sections below.
"mrextractjob" is pretty special-purpose. For details, see "Fetching information about historical jobs" below.
Logs
Historical logs
Historical logs for all components are uploaded to Manta hourly at
/poseidon/stor/logs/COMPONENT/YYYY/MM/DD/HH
. This works by rotating them
hourly into /var/log/manta/upload inside each zone, and then uploading the files
in that directory to Manta.
The most commonly searched logs are the muskie logs, since these contain logs
for all requests to the public API. There's one object in each
/poseidon/stor/logs/muskie/YYYY/MM/DD/HH/
directory per muskie server
instance. If you need to look at the live logs (because you're debugging a
problem within the hour that it happened, or because Manta is currently down),
see "real-time logs" below. Either way, if you have the x-server-name from a
request, that will tell you which muskie instance handled the request so that
you don't need to search all of them.
If Manta is not up, then the first priority is generally to get Manta up, and you'll have to use the real-time logs to do that.
Real-time logs and log formats
Unfortunately, logging is not standardized across all Manta components. There are three common patterns:
- Services log to their SMF log file (usually in the bunyan format, though startup scripts tend to log with bash(1) xtrace output).
- Services log to a service-specific log file in bunyan format (e.g., /var/log/muskie.log).
- Services log to an application-specific log file (e.g., haproxy, postgres).
Most custom services use the bunyan format. The "bunyan" tool is installed in /usr/bin to view these logs. You can also snoop logs of running services in more detail using bunyan's built-in DTrace probes. If you find yourself needing to look at the current log file for a component (i.e., can't wait for the next hourly upload into Manta), here's a reference for the service's that don't use the SMF log file:
Service | Path | Format |
---|---|---|
muskie | /var/log/muskie.log | bunyan |
moray | /var/log/muskie.log | bunyan |
mbackup (the log file uploader itself) |
/var/log/mbackup.log | bash xtrace |
haproxy | /var/log/haproxy.log | haproxy-specific |
mackerel (metering) | /var/log/mackerel.log | bunyan |
mola | /var/log/mola*.log | bunyan |
zookeeper | /var/log/zookeeper/zookeeper.log | zookeeper-specific |
redis | /var/log/redis/redis.log | redis-specific |
Most of the remaining components log in bunyan format to their service log file (including binder, config-agent, electric-moray, jobsupervisor, manatee-sitter, marlin-agent, and others).
Job archives
For every job that's ever run on the system, the system records the final
"job.json" file into Manta under
/poseidon/stor/job_archives/YYYY/MM/DD/HH/$JOBID.json
. This can be useful for
limited analysis of jobs run as well as for debugging specific jobs run in the
past.
Usage reports and storage capacity
Usage reports for compute, storage, and requests are generated regularly by the metering service. Marlin jobs are kicked off via cron in the ops zone to process Marlin logs for compute usage, metadata tier dumps for storage usage, and muskie logs for request and bandwidth. Additionally, a summary of the three reports is generated from the primary usage reports. These reports are saved to Manta under the following paths:
Usage report | Path | Frequency |
---|---|---|
compute | /poseidon/stor/usage/compute/YYYY/MM/DD/HH/hHH.json |
hourly |
request | /poseidon/stor/usage/request/YYYY/MM/DD/HH/hHH.json |
hourly |
storage | /poseidon/stor/usage/storage/YYYY/MM/DD/00/h00.json |
daily |
summary | /poseidon/stor/usage/summary/YYYY/MM/DD/dDD.json |
daily |
Usage output from storage metering is useful for determining logical usage for
each user in Manta. For a good idea of system-wide logical storage usage, sum
up the usage for each user, e.g., with
mget /poseidon/stor/usage/YYYY/MM/DD/HH/hHH.json |\
json -ga storage.public.bytes storage.stor.bytes storage.jobs.bytes storage.reports.bytes |\
awk '{sum+=$1+$2+$3+$4}END{print sum}'
Note, however, that the logical usage can be a poor indicator of physical usage. Since a Manta object ultimately lives on a ZFS filesystem with compression, physical usage may be less than the logical usage that metering reports indicate. Storage reports also count cross-account links once for each account, even though there is only a single set of copies of the objects. Metering also rounds up small objects to a minimum object size.
Request Throttling
Manta provides a coarse request throttle intended to be used when the system is under extreme load and is sufferring availability problems that cannot be isolated to a single Manta component. When the throttle is enabled and muskie has reached its configured capacity, the throttle will cause muskie to drop new requests and notify clients their requests have been throttled by sending a response with HTTP status code 503. The throttle is disabled by default.
Inbound request activity and throttle statistics can be observed by running
/opt/smartdc/muskie/bin/throttlestat.d
in a webapi zone in which the muskie processes have the throttle enabled. The script will output rows of a table with the following columns every second:
THROTTLED-PER-SEC
- The number of requests throttled in the last second.AVG-LATENCY-MS
- The average number of milliseconds that requests which completed in the last second spent in the request queue.MAX-QLEN
- The maximum number of queued requests observed in the last second.MAX-RUNNING
- The maximum number of concurrent dispatched request handlers observed in the last second.
If the throttle is not enabled, this script will print an error message indicating a missing DTrace provider. The message will look like this:
dtrace: failed to compile script ./throttlestat.d: line 16: probe
description muskie-throttle*:::queue_enter does not match any probes
If the script is run when the throttle is enabled, and it continues running as the throttle is disabled, it will subsequently appear to indicate no request activity. This is neither an error nor a sign of service availability lapse. It just indicates the fact that the DTrace probes being used by the script are not firing. Care should be taken to ensure that this script is used to collect metrics only when the throttle is enabled.
The throttle is "coarse" because its capacity is a function of all requests to the system, regardless of their originating user, IP address, or API operation. Any type of request can be throttled.
The request throttle is implemented on a per-process level, with each "muskie" process in a "webapi" zone having its own throttle. The throttle exposes three tunables:
Tunable Name | Default Value | Description |
---|---|---|
MUSKIE_THROTTLE_ENABLED |
false | whether the throttle enabled |
MUSKIE_THROTTLE_CONCURRENCY |
50 | number of allowed concurrent requests |
MUSKIE_THROTTLE_QUEUE_TOLERANCE |
25 | number of allowed queued requests |
These tunables can be modified with commands of the following form:
sapiadm update $(sdc-sapi /services?name=webapi | json -Ha uuid) \
metadata."MUSKIE_THROTTLE_ENABLED"=true
Muskies must be restarted to use the new configuration:
manta-oneach -s webapi 'svcadm restart "*muskie-*"'
Requests are throttled when the muskie process has exhausted all slots available for concurrent requests and reached its queue threshold.
Throttle Parameter Trade-offs
In general, higher concurrency values will result in a busier muskie process that handles more requests at once. Lower concurrency values will limit the number of requests the muskie will handle at once. Lower concurrency values should be set to limit the CPU load on Manta.
Higher queue tolerance values will decrease the likelihood of requests being rejected when Manta is under high load but may increase the average latency of queued requests. This latency increase can be the result of longer queues inducing longer delays before dispatch.
Lower queue tolerance values will make requests more likely to be throttled quickly under load. Lower queue tolerance values should be used when high latency is not acceptable and the application is likely to retry on receipt of a 503. Low queue tolerance values are also desirable if the zone is under memory pressure.
Multipart uploads prefix length
Overview
The Manta multipart upload API stores the part directories of an account's
ongoing multipart uploads under the directory tree /$MANTA_USER/uploads
.
Within the top-level directory, part directories are stored in subdirectories
based on some number of the first characters of the multipart upload's UUID.
The number of characters used to split multipart uploads is referred to as the
"prefix length".
For example, in a Manta deployment for which the prefix length is set to 3, a multipart upload would have an upload directory that looks like this:
/$MANTA_USER/uploads/f00/f00e51d2-7e47-4732-8edf-eb871296b343
Note that the parent directory of the parts directory, also referred to as its "prefix directory", has 3 characters, the same as the prefix length.
The following multipart upload would have been created in a Manta deployment with a prefix length of 1:
/$MANTA_USER/uploads/d/d77feb78-cd7f-481f-a6c7-f653c80c7331
Changing the prefix length
The prefix length is configurable in SAPI, represented as the
MUSKIE_MPU_PREFIX_DIR_LEN
SAPI variable under the "webapi" service. For
example, to change the prefix length of a deployment to 2, you could run:
sapiadm update $(sdc-sapi /services?name=webapi | json -Ha uuid) \
metadata."MUSKIE_MPU_PREFIX_DIR_LEN"=2
As with other configuration changes to the "webapi" service, you must restart the "webapi" zones to see the configuration change.
Multipart uploads created with a different prefix length within the same Manta deployment will continue to work after the prefix length is changed.
Prefix length tradeoffs
The prefix length dictates the number of subdirectories allowed in the top-level
/$MANTA_USER/uploads
directory. Because the number of entries in a Manta
directory should be limited, this affects how many ongoing multipart uploads are
available for a given account. Increasing the prefix length also increases the
number of requests required to list all multipart uploads under a given account.
Consequently, a smaller prefix length allows for fewer ongoing multipart uploads
for a single account, but less work to list them all; larger prefix directories
allow more ongoing multipart uploads, but require more work to list them.
For example, in a Manta deployment with a prefix length of 3, a given account may have up to 4096 prefix directories, allowing for about 4 billion ongoing multipart uploads for a given account. Listing all of the multipart uploads ongoing requires a maximum of 4096 directory listings operations. Compare this to a deployment with a prefix length of 1, which has a maximum of 256 prefix directories and allows for about 256 million multipart uploads, but only up to 256 directory listings are required to list all multipart uploads under an account.
Accelerated Garbage Collection
Overview
The Manta Accelerated Garbage Collection pipeline consists of a number of 'garbage-collector' instances which read delete records from metadata-tier database tables and transform them into instructions that are stored in a special (and configurable) location in the Manta object namespace. These instructions are processed by a cron job that runs on each of the Manta storage servers.
Tunables
The 'garbage-collector' instances deployed in each Manta leveraging accelerated gc were designed to be highly-configurable. However, reasonable defaults based on performance testing have been set for all three Manta deployment sizes so that they do not need to be modified out of the box.
If needed, operators should use the SAPI tunables to modulate the impact accelerated garbage-collection has on the datapath. It is recommended that all collectors be configured consistently.
These tunables are summarized here:
General Tunables
GC_ASSIGNED_SHARDS
is an array of objects describing the index shards that a given garbage-collector is configured to search for records from. The default value is[]
. It is recommended that this value not exceed 6 or 7 shards.GC_ASSIGNED_BUCKETS
is an array of objects describing which buckets a garbage-collector instance should attempt to read records from. By default, this array contains only an object referring to themanta_fastdelete_queue
.GC_CONCURRENCY
is a positive integer describing how many concurrent workers should be used to read delete records, upload instructions, and delete records per shard assigned to a collector. This means that settingGC_CONCURRENCY=2
on a garbage-collector configured to read records from 2 shards results in an instance with 4 workers total. The default value depends on the size of the Manta deployment (1-2).GC_CACHE_CAPACITY
is a positive integer that serves as an upper bound on the total number of cache entries a garbage-collector may hold at once. It is a coarse limit that can be applied to lower the memory usage of the collector if the CN on which it is deployed is experiencing above-average memory-pressure.
Delete Record Ingest Tunables
GC_RECORD_READ_BATCH_SIZE
is a positive integer describing how many records the garbage-collector will ask for per metadata-tier request. The default value varies with the deployment size, but should generally be pretty high since the garbage-collector targets high-throughput.GC_RECORD_READ_WAIT_INTERVAL
is a positive integer describing the number of milliseconds the garbage-collector should wait between metadata tier requests to find new delete records.GC_RECORD_READ_SORT_ATTR
is a Moray field identifier that should be used to decide what order records should be read in from the metadata tier. The default value is_mtime
, which ensures that delete records are processed in the order that they were created.GC_RECORD_READ_SORT_ORDER
is one ofASC|DESC|asc|desc
and decides which order the records should be processed in. The default value isASC
.
Delete Instruction Upload Tunables
GC_INSTR_UPLOAD_BATCH_SIZE
is a positive integer describing how many lines to include in each delete instruction object uploaded to Manta. Each instruction object that the garbage-collector uploads has a fixed storage overhead on the metadata-tier, so this field should be set high for production deployments. Performance testing shows that the garbage-collector performs well when this tunable is set toGC_RECORD_READ_BATCH_SIZE/GC_CONCURRENCY
.GC_INSTR_UPLOAD_FLUSH_DELAY
is a positive integer indicating the number of milliseconds to wait between each instruction object upload. It is recommended that this value matchGC_RECORD_READ_WAIT_INTERVAL
, but can be safely set otherwise as a form of backpressure.GC_INSTR_UPLOAD_PATH_PREFIX
is the path under which per-shrimp instructions should be uploaded. Today, this value must be/poseidon/stor/manta_gc/mako
, which is where the current version of the mako image searches for delete instructions. This value should not be changed in production deployments.
Delete Record Cleaning Tunables
GC_RECORD_DELETE_BATCH_SIZE
is a positive integer describing how many records the garbage-collector should clean per metadata-tier request. This value should generally be equal toGC_RECORD_READ_BATCH_SIZE
. To minimize impact on the metadata tier, this tunable should generally be set to optimize for throughput in delete record cleaning.GC_RECORD_DELETE_DELAY
is a positive integer describing the number of milliseconds the garbage-collector should wait between metadata-tier requests to cleanup processed delete records. This tunable should be used to apply backpressure on the garbage-collector in times of above-average metadata-tier load. There is no harm in setting this value lower thanGC_INSTR_UPLOAD_FLUSH_DELAY
orGC_RECORD_READ_WAIT_INTERVAL
as the garbage-collector will only actually issue delete requests to the metadata tier if it knows that there are records to be deleted.
Reading Garbage-Collector Tunables
All the tunables described in this section are stored either in the SAPI
garbage-collector service object, or in the individual instance objects for each
collector. Generally, GC_ASSIGNED_SHARDS
will be set on a per-instance basis.
Other tunables are likely to be set within the service object. One way to read
the garbage-collector configuration is to look at the metadata values in the
service object, and each of the instance objects:
headnode$ sdc-sapi /services?name=garbage-collector | json metadata
headnode$ sdc-sapi /instances?service_uuid=$(sdc-sapi \
/services?name=garbage-collector | json -Ha uuid) | json -Ha metadata
Another way to retrieve tunables on a per instance basis is via the admin http interface that each garbage-collector runs on startup:
headnode$ manta-oneach -z <instance> "curl -X GET localhost:2020/tunables"
The admin interface exposes a number of other endpoints. For an exhaustive list, see the garbage-collector README.
The mapping between garbage-collector instances and shards can also be read via manta-adm:
headnode$ manta-adm accel-gc show -j
Modifying Garbage-Collector Tunables
Deployment Wide Modifications
Deployment-wide garbage-collector modifications should be made by modifying the garbage-collector SAPI service object. This can be done with the tools like sapiadm:
headnode$ sdc-sapi -H /services?name=garbage-collector > update.json
... modify update.json ...
headnode$ sapiadm update $(json -f update.json uuid) -f update.json
Propagating changes made this way will require restarting the garbage-collectors.
Per-Instance Modifications
In some cases, it may make sense to modify the tunables of only a subset of the
deployed garbage-collectors. This can be done with SAPI tools directly, but
manta-adm
exposes an interface for this as well:
headnode$ manta-adm accel-gc show -j > pre.json
The output, pre.json, will contain a json object mapping instance UUIDs to json objects corresponding to the SAPI instance metadata sub-object:
{
"<INSTANCE-UUID>": {
... instance metadata ...
}
}
Modifications to a subset of garbage-collector instances can be made to this one file and then applied with:
headnode$ manta-adm accel-gc update pre.json
In order for the tunables to take effect, the garbage-collector instances themselves must be restarted:
manta-oneach -s garbage-collector "svcadm restart config-agent; sleep 5; svcadm restart garbage-collector"
Metrics
The garbage-collector exposes metrics through a node-artedi metrics server that listens on port 3020. The following is a table of metrics exported (these do not include metrics exported by garbage-collector dependencies, such as the node-moray client):
name | type | description |
---|---|---|
gc_delete_records_read | counter | records read from manta_fastdelete_queue |
gc_cache_entries | gauge | the number of entities cached |
gc_mako_instrs_uploaded | counter | number of delete instructions uploaded |
gc_bytes_marked_for_delete | counter | bytes made ready to be reclaimed |
gc_delete_records_cleaned | counter | number of delete records removed |
Muskie metrics that may be relevant to operators deploying accelerated garbage-collection:
name | type | description |
---|---|---|
muskie_deleted_bytes | counter | bytes for which delete APIs have completed |
Debugging: general tasks
Locating servers
All Triton compute nodes have at least two unique identifiers:
- the server UUID, provided by the system firmware and used by Triton
- the hostname, provided by operators
The global zone's "admin" network IP address should also be unique.
The manta-adm cn
command shows information about the Triton compute nodes in
the current datacenter on which Manta components are deployed. For example, to
fetch the server uuid and global zone IP for RM08218, use:
# manta-adm cn -o host,server_uuid,admin_ip RM08218
HOST SERVER UUID ADMIN IP
RM08218 00000000-0000-0000-0000-00259094c058 10.10.0.34
See the manta-adm(1)
manual page for details.
Locating storage IDs and compute IDs
Manta Storage CNs have additional identifiers:
- a manta compute ID, used by the jobs subsystem.
- one or more manta storage IDs, used for object metadata. There's one storage ID per storage zone deployed on a server, so there can be more than one storage ID per CN, although this is usually only the case in development environments.
You can generate a table that maps hostnames to compute ID and storage IDs for the current datacenter:
# manta-adm cn -o host,compute_id,storage_ids storage
HOST COMPUTE ID STORAGE IDS
RM08213 12.cn.us-east.joyent.us 2.stor.us-east.joyent.us
RM08211 20.cn.us-east.joyent.us 1.stor.us-east.joyent.us
RM08216 19.cn.us-east.joyent.us 3.stor.us-east.joyent.us
RM08219 11.cn.us-east.joyent.us 4.stor.us-east.joyent.us
Note that the column name is "storage_ids" (with a trailing "s") since there may be more than one.
See the manta-adm(1)
manual page for details.
Locating Manta component zones
To find a particular manta zone, log into one of the headnodes and run
manta-adm show
to list all Manta-related zones in the current datacenter. You
can list all of the zones in all datacenters with manta-adm show -a
.
manta-adm show
supports a number of other features, including summary output,
filtering by service name, grouping results by compute node, and printing
various other properties about a zone. For more information and examples, see
the manta-adm(1)
manual page.
Accessing systems
To access ... | do this... |
---|---|
a headnode | ssh directly to the headnode. |
a compute node | ssh to the headnode for that datacenter, then ssh to the CN's GZ ip (see "manta-adm cn" above) |
a compute zone | ssh to the headnode for that datacenter, then use manta-login ZONETYPE or manta-login ZONENAME , where ZONENAME can actually be any unique part of the zone's name. |
a compute node's console | ssh to the headnode for that datacenter, find the compute node's service processor IP, then:ipmitool -I lanplus -H SERVICE_PROCESS_IP -U ADMIN -P ADMIN sol activate To exit the console, press enter, then ~. , prefixed with as many "~"s as you have ssh sessions. (If ssh'd to the headnode, use enter, then ~~. ) If you don't use the prefix ~ s, you'll kill your ssh connection too. |
a headnode's console | ssh to the headnode of one of the other datacenters, then "sdc-login" to the "manta" zone. From there, use the above "ipmitool" command in the usual way with the headnode's SP IP. |
Locating Object Data
This section explains how to locate persisted object data throughout Manta. There are only two places where data is persisted:
- In
postgres
zones: Object metadata, in a Postgres database. - In
storage
zones: Object contents, as a file on disk
Locating Object Metadata
The "mlocate" tool takes a Manta object name (like "/dap/stor/cmd.tgz"), figures out which shard it's stored on, and prints out the internal metadata for it. You run this inside any "muskie" (webapi) zone:
[root@204ac483 (webapi) ~]$ /opt/smartdc/muskie/bin/mlocate /dap/stor/cmd.tgz | json
{
"dirname": "/bc8cd146-fecb-11e1-bd8a-bb6f54b49808/stor",
"key": "/bc8cd146-fecb-11e1-bd8a-bb6f54b49808/stor/cmd.tgz",
"headers": {},
"mtime": 1396994173363,
"name": "cmd.tgz",
"creator": "bc8cd146-fecb-11e1-bd8a-bb6f54b49808",
"owner": "bc8cd146-fecb-11e1-bd8a-bb6f54b49808",
"type": "object",
"contentLength": 17062152,
"contentMD5": "vVRjo74mJquDRsoW2HJM/g==",
"contentType": "application/octet-stream",
"etag": "cb1036e4-3b57-c118-cd46-961f6ebe12d0",
"objectId": "cb1036e4-3b57-c118-cd46-961f6ebe12d0",
"sharks": [
{
"datacenter": "staging-2",
"manta_storage_id": "2.stor.staging.joyent.us"
},
{
"datacenter": "staging-1",
"manta_storage_id": "1.stor.staging.joyent.us"
}
],
"_moray": "tcp://electric-moray.staging.joyent.us:2020",
"_node": {
"pnode": "tcp://3.moray.staging.joyent.us:2020",
"vnode": 7336153,
"data": 1
}
}
All of these implementation details are subject to change, but for reference, these are the pieces you need to locate the object:
- "sharks": indicate which backend storage servers contain copies of this object
- "creator": uuid of the user who created the object
- "objectId": uuid for this object in the system. Note that an objectid is allocated when an object is first created. Two objects with the same content do not generally get the same objectid, unless the second object was created with "mln".
You won't need the following fields to locate the object, but they may be useful to know about:
- "key": the internal name of this object (same as the public name, but the login is replaced with the user's uuid)
- "owner": uuid of the user being billed for this link. This can differ from the creator if the owner used "mln" to create their own link to an object created by someone else.
- "_node"."pnode": indicates which metadata shard stores information about this object.
- "type": indicates whether something refers to an object or directory
- "contentLength", "contentMD5", "contentType": see corresponding HTTP headers
Locating Object Contents
Now that you know what sharks the object is on you can pull the object contents directly from the ops box by creating a URL with the format:
http://[manta_storage_id]/[creator]/[objectId]
You can use "curl" to fetch this from the "ops" zone, for example.
More commonly, you'll want to look at the actual file on disk. For that, first map the "manta_storage_id" to a specific storage zone, using a command like this to print out the full mapping:
# manta-adm show -a -o storage_id,datacenter,zonename storage
STORAGE ID DATACENTER ZONENAME
1.stor.staging.joyent.us staging-1 f7954cad-7e23-434f-be98-f077ca7bc4c0
2.stor.staging.joyent.us staging-2 12fa9eea-ba7a-4d55-abd9-d32c64ae1965
3.stor.staging.joyent.us staging-3 6dbfb615-b1ac-4f9a-8006-2cb45b87e4cb
Then use "manta-login" to log into the corresponding storage zone:
# manta-login 12fa9eea
[Connected to zone '12fa9eea-ba7a-4d55-abd9-d32c64ae1965' pts/2]
[root@12fa9eea (storage) ~]$
The object's data will be stored at /manta/$creator_uuid/$objectid:
[root@12fa9eea (storage) ~]$ ls -l
/manta/bc8cd146-fecb-11e1-bd8a-bb6f54b49808/cb1036e4-3b57-c118-cd46-961f6ebe12d0
-rw-r--r-- 1 nobody nobody 17062152 Apr 8 2014
/manta/bc8cd146-fecb-11e1-bd8a-bb6f54b49808/cb1036e4-3b57-c118-cd46-961f6ebe12d0
There will be a copy of the object at that path in each of the sharks
listed
in the metadata record.
Debugging: was there an outage?
When debugging their own programs, in effort to rule out Manta as the cause (or when they suspect Manta as the cause), users sometimes ask if there was a Manta outage at a given time. In rare cases when there was a major Manta-wide outage at that time, the answer to the user's question may be "yes". More often, though, there may have been very transient issues that went unnoticed or that only affected some of that user's requests.
First, it's important to understand what an "outage" actually means. Manta provides two basic services: an HTTP-based request API and a compute service managed by the same API. As a result, an "outage" usually translates to elevated error rates from either the HTTP API or the compute service.
To check for a major event affecting the API, locate the muskie logs for the hour in question (see "Logs" above) and look for elevated server-side error rates. An easy first cut is to count requests and group by HTTP status code. You can run this from the ops zone (or any environment configured with a Manta account that can access the logs):
# mfind -t o /poseidon/stor/logs/muskie/2014/11/21/22 | \
mjob create -o
-m "grep '\"audit\"' | json -ga res.statusCode | sort | uniq -c" \
-r "awk '{ s[\$2] += \$1; } END {
for(code in s) { printf(\"%8d %s\n\", s[code], code); } }'"
That example searches all the logs from 2014-11-21 hour 22 (22:00 to 23:00 UTC) for requests ("audit" records), pulls out the HTTP status code from each one, and then counts the number of requests for each status code. The reduce phase combines the outputs from scanning each log file by adding the counts for each status code and then printing out the aggregated results. The end output might look something like this:
293950 200
182 201
179 202
267786 204
...
(You can also use Dragnet to scan logs more quickly.)
That output indicates 294,000 requests with code 200, 268,000 requests with code 204, and so on. In HTTP, codes under 300 are normal. Codes from 400 to 500 (including 400, not 500) are generally client problems. Codes over 500 indicate server problems. Some number of 500 errors don't necessarily indicate a problem with the service -- it could be a bug or a transient problem -- but if the number is high (particularly compared to normal hours), then that may indicate a serious Manta issue at the time in question.
If the number of 500-level requests is not particularly high, then that may indicate a problem specific to this user or even just a few of their requests. See "Debugging API failures" below.
Debugging API failures
Users often report problems with their own programs acting as Manta clients (possibly using our Node client library). This may manifest as an error message from the program or an error reported in the program's log. Users may ask simply: "was there a Manta outage at such-and-such time?" To answer that question, see "was there an outage?" above. If you've established that there wasn't an outage, here's how you can get more information about what happened.
For most problems that are caused by the Manta service itself (as opposed to client-side problems), there will be information in the Manta server logs that will help explain the root cause. The best way to locate the corresponding log entries is for clients to log the request id of failed requests and for users to provide the request ids when seeking support. The request id is reported by a server HTTP header, and it's normally logged by the Node client library. While it's possible to search for log entries by timestamp, account name, Manta path, or status code, not only is it much slower, but it's also not sufficient for many client applications that end up performing a lot of similar operations on similar paths for the same user around the same time (e.g., creating a directory tree). For requests within the last hour, it's very helpful to get the x-server-name header as well.
To find the logs you need, see "Logs" above. Once you've found the logs (either in Manta or inside the muskie zones, depending on whether you're looking at a historical or very recent request):
- If you have a request id and server name, pick the log for that server name and grep for the request id.
- If you have a request id, grep all the logs for that hour for that request id.
- If you don't have either of these, you can try grepping for the user's account uuid (which you can retrieve by searching adminui for the user's account login) or other relevant parameters of the request. This process is specific to whatever information you have. The logs are just plaintext JSON.
You should find exactly one request matching a given request id. The log entry for the request itself should include a lot of details about the request and response, including internal error messages. For 500-level errors (server errors), there will be additional log entries for all the debug-level logging for that request.
Obviously, most of this requires Manta to be operating. If it's not, that's generally the top priority, and you can use the local log files on muskie servers to debug that.
Debugging Manta housekeeping operations
Manta performs a number of housekeeping operations that are based on the contents of the metadata tier, including garbage collection, auditing, metering, and object rebalancing. These are documented with the Mola project, particularly under "system crons". In summary: a pipeline gets kicked off daily that saves database dumps of the metadata tier into Manta itself and then uses normal Manta jobs to first unpack these dumps and then process them for these various purposes. If any of these steps fails, manual intervention may be required to complete these operations.
If the pipeline has failed, it's important to figure out why. In practice, the most common reason is that the database dumps were not uploaded on time. The manta-hk tool is provided to help figure this out. Its manual page describes its usage.
When this pipeline has failed, use the manta-hk tool to determine whether database dumps were successfully uploaded, and early enough for the rest of the pipeline to complete.
Under the hood, manta-hk checks for database dumps that are normally uploaded to
/poseidon/stor/manatee_backups
by the async peer of each shard. It also
checks for the objects that normally get unpacked into the same directory, which
may look like this (though the set of objects differs based on what the shard is
being used for):
# mls /poseidon/stor/manatee_backups/2.moray.us-east.joyent.us/2015/06/02/00
buckets_config-2015-06-02-00-00-33.gz
manta-2015-06-02-00-00-33.gz
manta_delete_log-2015-06-02-00-00-33.gz
manta_directory_counts-2015-06-02-00-00-33.gz
medusa_sessions-2015-06-02-00-00-33.gz
moray-2015-06-02-00-00-33.gz
When something has failed, you'll typically find one of a few situations:
- The database dumps themselves are missing. ("manta-hk" should point this out explicitly, but the symptom is that there's no "moray-*.gz" object in this directory, or the directory doesn't exist at all.)
- The database dumps are present, but the unpacked files are missing. (Again, "manta-hk" points this out explicitly.) If the dump is present, then this usually happens because the dump did not complete on-time for the unpacking job. It's also possible that the unpacking job failed for some other reason.
The following sections describe how to resolve both of these situations. Either way, when you've resolved that problem, you'll need to rerun the rest of the pipeline. That's also described below.
When a database dump is missing
Manatee takes and keeps several ZFS snapshots for the purposes of disaster recovery. These snapshots can be used to save a new database dump to replace one that may have failed.
- On any peer in the shard, use
manatee-adm peers
to see which peer is the async and log into that peer. List the ZFS snapshots to identify the snapshot you want to use to regenerate the dump. This command is useful to generate human-readable timestamps:
for i in $(zfs list -H -t snapshot | tail -100 | cut -f1); do node -e "console.log(\"$i\", new Date(+\"$i\".split('@')[1]).toISOString())"; done
Run the
pg_custom_dump.sh
script located in the manatee directory using the identified snapshot./opt/smartdc/manatee/pg_dump/pg_custom_dump.sh zones/a5fa2966-0dd5-40ac-9a63-14d91343c196/data/manatee@1421885974910
When this completes, you'll need to proceed to the next section as well.
When the database dump was not unpacked
If the database dump is present, but none of the other objects are present, then the dump was not successfully unpacked. You can kick off a job to do this by running a command like this one from the "ops" zone:
# /opt/smartdc/mola/bin/kick_off_pg_transform.js -b /poseidon/stor/manatee_backups/2.moray.us-east.joyent.us/2015/06/02/00/moray-2015-06-02-00-00-37.gz 2>&1 | bunyan
The argument for the "-b" option is the name of the database dump object in Manta. You'll need to run this command for each dump that you want to unpack (i.e., for each shard).
Running the rest of the pipeline
If you had to manually trigger a database dump or a dump unpacking job, then it's likely that the daily metering, garbage collection, audit, and cruft jobs will have failed. Garbage collection, auditing, and cruft jobs are not time-sensitive, and generally do not need to be re-run by hand because you can wait for the next day's run to complete. If you want to re-run them by hand, see the documentation in the Mola subproject.
The metering jobs, however, should generally be re-run by hand. Rerun a metering job using the "meter" command inside the "ops" zone, specifying a specific date. Metering scripts poll for job completion in order to create the "latest" link once the job is done. If the "latest" link is not necessary, you can interrupt the metering script after job input has been closed.
/opt/smartdc/mackerel/bin/meter -j "storage" -d "2015-06-02" 2>&1 | bunyan
/opt/smartdc/mackerel/bin/meter -j "request" -d "2015-06-02T05:00:00" 2>&1 | bunyan
/opt/smartdc/mackerel/bin/meter -j "compute" -d "2015-06-02T07:00:00" 2>&1 | bunyan
/opt/smartdc/mackerel/bin/meter -j "accessLogs" -d "2015-06-02T11:00:00" 2>&1 | bunyan
/opt/smartdc/mackerel/bin/meter -j "summarizeDaily" -d "2015-06-02" 2>&1 | bunyan
Note that the "summarizeDaily" job depends on the output of the "storage", "request" and "compute" jobs from the previous day. If any of the previous day's jobs were incomplete, the "summarizeDaily" job will have to be re-run after the previous day's metering data has been generated using the above steps.
Authcache (mahi) issues
Please see the docs included in the mahi repository.
Debugging Marlin: distributed state
The "mrjob" and "mrerrors" tools summarize Marlin state by reading it directly from Moray. This is usually the first step towards figuring out what's going on with Marlin overall or with a particular job. You should be able to run these tools directly from the "ops" zone, but you can also set them up by cloning the marlin.git repo and running "npm install" to build the tools. Some examples below use the Moray client tools, which should also be available if you follow the above procedure.
List running jobs
Use mrjob list -s running
:
ops$ mrjob list -s running
JOBID LOGIN S NOUT NERR NRET NDISP NCOMM
b1f8c8ce-8afe-445e-8846-484ac908ebd0 jason R 0 0 0 1 0
List recently completed jobs
Use mrjob list -t 60
, where "60" is the number of seconds back to look:
ops$ mrjob list -t 60
JOBID LOGIN S NOUT NERR NRET NDISP NCOMM
ed4eff3c-5e2e-4fcb-ad67-3ac09629056f jason D 1 0 0 485 485
Fetch details about a job
Use mrjob get
:
ops$ mrjob get a2922490-c8de-e4b3-abbc-f3367464b651
Job a2922490-c8de-e4b3-abbc-f3367464b651
Job name interactive compute job
User thoth (aed35417-4c53-4d6c-a127-fd8a6e55723b)
State running
Supervisor dd55ea98-9dc9-4b57-84ab-380ba5252fed
Created 2014-01-16T22:22:49.173Z (1h10m12.679s ago)
Progress 1 inputs read, 1 tasks dispatched, 0 tasks committed
Results 0 outputs, 0 errors, 0 retries
Pending 0 uncommitted done, 0 intermediate objects
Phase 0 map
You can use -p
to get details about what the job runs in each phase:
ops$ mrjob get -p a2922490-c8de-e4b3-abbc-f3367464b651
Job a2922490-c8de-e4b3-abbc-f3367464b651
Job name interactive compute job
User thoth (aed35417-4c53-4d6c-a127-fd8a6e55723b)
State running
Supervisor dd55ea98-9dc9-4b57-84ab-380ba5252fed
Created 2014-01-16T22:22:49.173Z (1h11m00.527s ago)
Progress 1 inputs read, 1 tasks dispatched, 0 tasks committed
Results 0 outputs, 0 errors, 0 retries
Pending 0 uncommitted done, 0 intermediate objects
Phase 0 map
asset /poseidon/public/medusa/agent.sh
asset /thoth/stor/medusa-config-fa937d4b-f699-4f1b-bea5-69147fa97977.json
asset /thoth/stor/thoth/analyzers/.thoth.87707.1389910968.355
exec "/assets/poseidon/public/medusa/agent.sh"
See mrjob --help
for more options.
If the job completed more than 24 hours ago, then mrjob may report an error like:
ops$ mrjob get 43a9949b-4fab-4037-a32a-371146ac44f9
mrjob: failed to fetch job: failed to fetch job: marlin_jobs_v2::43a9949b-4fab-4037-a32a-371146ac44f9 does not exist
That's because jobs are removed from the live database about 24 hours after they complete. In that case, see "Fetching information about older jobs".
List job inputs, outputs, retries, and errors (as a user would see them)
All of these are capped at 1000 results by default.
mrjob inputs JOBID
: list input objects for a job (capped at 1000)
mrjob outputs JOBID
: list output objects from a job (capped at 1000)
mrjob errors JOBID
: list retries from a job (capped at 1000)
mrjob retries JOBID
: list retries from a job (capped at 1000)
Fetch summary of errors for a job
Use mrerrors -j JOBID
. The output includes internal error messages and
retried errors, which are not exposed to end users.
List tasks not-yet-completed for a given job (and see where they're running)
Use mrjob where
to list uncompleted tasks and see where they're running:
ops$ mrjob where e493ab87-fcf0-e991-8b82-8f649696d197
TASKID PH NIN SERVER
6ce64b78-691b-4703-970a-de2fb84b69f1 0 - 1.cn.us-east.joyent.us
map: /dap/stor/mdb.log
Note that physical storage nodes in Manta are identified by mantaComputeId rather than server_uuid or hostname. You need to translate this to figure out which physical server that corresponds to.
See the history of a given task
You may find a task through mrjob get
or mrjob where
and want to know its
history: what inputs or previous-phase tasks caused this task to be created? Is
it a retry of a previous task? How many times was it retried, and on which
hosts? mrjob taskhistory
helps answer these questions.
The point of this tool is to show two things: how a given input moved through multiple phases in Marlin, and how individual tasks are retried. The goal is that given any taskid, it will find predecessors in previous phases, predecessors in the same phase (retries), successors in the same phase (retries), and successors in subsequent phases. The main thing it doesn't do is go through reduce phases, because that's usually counter-productive and in general it's not possible to correlate inputs with outputs across a reduce phase.
Here's an example usage. I ran this job (note the phases):
ops$ mrjob get -p ea784e03-a735-cd29-d913-b1b9cb5f0503
Job ea784e03-a735-cd29-d913-b1b9cb5f0503
User dap (ddb63097-4093-4a74-b8e8-56b23eb253e0)
State done
Supervisor eff884b4-f678-4069-8522-1bbe2e4fcb90
Created 2014-01-17T19:22:02.326Z (16m38.446s ago)
Done 2014-01-17T19:22:35.110Z (32.784s total)
Archived 2014-01-17T19:22:38.064Z (16m02.708s ago)
Progress 100 inputs read, 242 tasks dispatched, 242 tasks committed
Results 15 outputs, 0 errors, 12 retries
Phase 0 map
exec "wc"
Phase 1 map
exec "wc"
Phase 2 reduce (15)
exec "wc"
Phase 3 map
exec "wc"
So it's 100 inputs -> map -> map -> 15 reducers -> map. Because Marlin is
currently disabled on 9.stor in production, there were retries in both map
phases and reduce phases, so this is a good example to show what
mrjob taskhistory
does. I used mrjob get -t
to find some of these tasks,
although if a job was currently stuck, you could also use mrjob where
.
Here's a normal history for one of the first phase tasks:
ops$ mrjob taskhistory 33b7f617-141e-4673-8056-a27a6f511b60
2014-01-17T19:22:02.814Z jobinput 318ed0ad-8aed-4f74-af90-a7cfefc87880
/dap/stor/datasets/cmd/cmd/acct/acctcms.c
2014-01-17T19:22:03.746Z map task 33b7f617-141e-4673-8056-a27a6f511b60
(attempt 1, host 11.cn.us-east.joyent.us)
/dap/stor/datasets/cmd/cmd/acct/acctcms.c
2014-01-17T19:22:04.142Z taskoutput b9bb82de-416d-4ac3-a962-09f75a140932
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/acct/acctcms.c.0.33b7f617-141e-4673-8056-a27a6f511b60
2014-01-17T19:22:08.663Z map task 1b370599-90b3-4c03-a388-c8967798d396
(attempt 1, host 25.cn.us-east.joyent.us)
2014-01-17T19:22:09.078Z taskoutput c98b68d1-1b76-4adf-845c-f7392d860694
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/acct/acctcms.c.1.1b370599-90b3-4c03-a388-c8967798d396
2014-01-17T19:22:13.398Z taskinput 1d4cf4de-9c4c-4841-b801-0595f69b2ff0
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/acct/acctcms.c.1.1b370599-90b3-4c03-a388-c8967798d396
2014-01-17T19:22:02.447Z reducer 015f6dbb-8bb3-4b07-b806-12bdf46fd8a8
(attempt 1, host 11.cn.us-east.joyent.us)
4 inputs
This shows the jobinput that created the task, the output from the task that created the next map task, the output from that task that becamse a taskinput for the reducer, and the reducer. For each task, it shows the host assigned to run it. You'd get the exact same output if you specified tasks 1b370599-90b3-4c03-a388-c8967798d396 or 015f6dbb-8bb3-4b07-b806-12bdf46fd8a8.
Here's an example where one of the early phase map tasks failed and had to be retried:
ops$ mrjob taskhistory a322ebe6-3279-40ee-8c7e-88130def17b4
2014-01-17T19:22:03.220Z jobinput 5f72c373-9155-459e-9032-0ac18ecaef6a
/dap/stor/datasets/cmd/cmd/addbadsec/addbadsec.c
2014-01-17T19:22:03.660Z map task a322ebe6-3279-40ee-8c7e-88130def17b4
(attempt 1, host 9.cn.us-east.joyent.us)
/dap/stor/datasets/cmd/cmd/addbadsec/addbadsec.c
2014-01-17T19:22:06.411Z error bb08a232-75d6-4b59-a80c-3f369f84d64a
InternalError
internal error: agent timed out
2014-01-17T19:22:07.551Z map task e4c80edb-5302-4f6f-af19-336be9834e92
(attempt 2, host 26.cn.us-east.joyent.us)
/dap/stor/datasets/cmd/cmd/addbadsec/addbadsec.c
2014-01-17T19:22:07.679Z taskoutput c79dc94d-5800-4e59-b808-998c94024c2f
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/addbadsec/addbadsec.c.0.e4c80edb-5302-4f6f-af19-336be9834e92
2014-01-17T19:22:12.279Z map task c6cbe67f-2c9d-4c50-ae0c-53590303f544
(attempt 1, host 19.cn.us-east.joyent.us)
2014-01-17T19:22:12.529Z taskoutput 70275969-c92f-4700-96c2-9564158be0b2
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/addbadsec/addbadsec.c.1.c6cbe67f-2c9d-4c50-ae0c-53590303f544
2014-01-17T19:22:15.271Z taskinput 22b96b55-86f2-43a1-9271-9a9334726a61
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/addbadsec/addbadsec.c.1.c6cbe67f-2c9d-4c50-ae0c-53590303f544
2014-01-17T19:22:02.447Z reducer 6e009faa-a0d8-478a-9b66-ae82852fbf45
(attempt 1, host 25.cn.us-east.joyent.us)
7 inputs
In this case, we see the map task we asked about, the error it produced, and the map retry task below it on a different host.
Here's what happens when we select a reducer that failed:
ops$ mrjob taskhistory 3ac67932-75ba-4ce0-891e-1b295949a3be
2014-01-17T19:22:02.447Z reducer 3ac67932-75ba-4ce0-891e-1b295949a3be
(attempt 1, host 9.cn.us-east.joyent.us)
input stream open
2014-01-17T19:22:06.424Z error c3923a5f-93ea-425e-92c3-694b6bf08b3d
InternalError
internal error: agent timed out
2014-01-17T19:22:07.542Z reducer c98bd373-6c08-4032-b405-bf0a0e18f820
(attempt 2, host 12.cn.us-east.joyent.us)
9 inputs
We don't see any of the previous or subsequent phase tasks because "taskhistory" doesn't cross reduce phases. (That would usually degenerate to showing everything in the job, which isn't useful here.)
Here's a particularly complicated case. The input went through two normal map phases, then became a taskinput to the second attempt for a reducer. We still show the first reducer here in the output, but it shows up before the taskinput, indicating that the first reducer failed logically before this object was assigned to the reducer, so it was assigned directly to the second attempt:
ops$ mrjob taskhistory 94851372-49b9-48fd-b5ca-b51b330561ab
2014-01-17T19:22:03.024Z jobinput 237d6925-75e4-4a0a-9186-cd214b510e6a
/dap/stor/datasets/cmd/cmd/acct/acctwtmp.c
2014-01-17T19:22:03.633Z map task 4906e7b9-c65e-4655-95d0-5bdcbda62b39
(attempt 1, host 26.cn.us-east.joyent.us)
/dap/stor/datasets/cmd/cmd/acct/acctwtmp.c
2014-01-17T19:22:04.164Z taskoutput 41dd8fac-2923-42ec-a893-43318596472b
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/acct/acctwtmp.c.0.4906e7b9-c65e-4655-95d0-5bdcbda62b39
2014-01-17T19:22:07.380Z map task 94851372-49b9-48fd-b5ca-b51b330561ab
(attempt 1, host 293.cn.us-east.joyent.us)
2014-01-17T19:22:07.604Z taskoutput 5cbb34ab-a0f4-4144-9629-629d323cc1f0
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/acct/acctwtmp.c.1.94851372-49b9-48fd-b5ca-b51b330561ab
2014-01-17T19:22:02.447Z reducer 660f7838-4055-49b3-8376-dec9648ec2a5
(attempt 1, host 9.cn.us-east.joyent.us)
input stream open
2014-01-17T19:22:06.397Z error 4263bcc0-3a5e-433b-9460-b5970044cb51
InternalError
internal error: agent timed out
2014-01-17T19:22:12.279Z taskinput 686236b8-1de2-4ef6-aa6b-e4f908c2497a
/dap/jobs/ea784e03-a735-cd29-d913-b1b9cb5f0503/stor/dap/stor/datasets/cmd/cmd/acct/acctwtmp.c.1.94851372-49b9-48fd-b5ca-b51b330561ab
2014-01-17T19:22:07.539Z reducer 318b47e5-a234-4fa0-b11e-e80701cfc90d
(attempt 2, host 9.cn.us-east.joyent.us)
input stream open
2014-01-17T19:22:11.437Z error 681faf97-2ae5-4938-89a8-d422e7156d11
InternalError
internal error: agent timed out
2014-01-17T19:22:12.689Z reducer 721187a7-5df1-4ce1-9c3b-9e54ffd71cce
(attempt 3, host 20.cn.us-east.joyent.us)
6 inputs
Using the Moray tools to fetch detailed state
Sometimes it's necessary to dig into the Moray state directly because "mrjob" doesn't have a subcommand to fetch exactly what you want. Please file tickets for such things, but in the meantime, you can use the Moray client tools to extract state directly. The Moray client tools should be available on your PATH if you've set up the Marlin tools.
Figuring out which jobsupervisor is managing a job
You can find the jobsupervisor that's managing a job with:
ops$ getobject marlin_jobs_v2 994703de-0c5c-49e8-ba98-8361d1624ae1 | \
json value.worker
4fdcffe8-30ef-476e-8266-279a241c76c0
where 994703de-0c5c-49e8-ba98-8361d1624ae1 is the jobid.
The returned value is the zonename of the jobsupervisor that normally manages the job. In most cases, this is also the jobsupervisor that's currently managing the job. However, it's possible for one jobsupervisor to take over for another. You can check this with:
ops$ findobjects marlin_health_v2 instance=4fdcffe8-30ef-476e-8266-279a241c76c0 | \
json value
{
"component": "worker",
"instance": "4fdcffe8-30ef-476e-8266-279a241c76c0",
"generation": "2013-07-02T16:23:36.810Z"
}
This case indicates that the supervisor is functioning normally. If one supervisor takes over for another, you'll see an "operatedBy" field with the uuid of the supervisor that's taken over for this supervisor.
Troubleshooting Accelerated Garbage Collection
This section serves as a checklist for common problems that might stall or break accelerated garbage collection pipeline.
Simple Checks
The following are simple checks that can be run to verify that the garbage-collection pipeline in your Manta deployment is correctly configured.
Verify the garbage-collectors are running
The simplest command checks whether each garbage-collector process is running:
headnode$ manta-oneach -s garbage-collector "svcs -xv garbage-collector"
Check the logs from the most recent run if the output shows that the service is disabled:
garbage-collector$ less -R $(svcs -L garbage-collector)
Another method for verifying that collectors are functional is:
headnode$ manta-oneach -s garbage-collector \
"curl -X GET localhost:2020/ping"
Verify that the correct shards are assigned to each garbage-collector
The simplest way to verify that the garbage-collectors have the correct assignment at the current moment is:
headnode$ manta-oneach -s garbage-collector \
"curl -X GET localhost:2020/shards"
The output of the above command may not necessary correspond with the SAPI instance metadata. If this is the case, the assignment may change after the next restart due to some garbage-collectors configuration being re-rendered by the config-agent. To verify that the SAPI instance metadata is correct:
headnode$ sdc-sapi /instances?service_uuid=$(sdc-sapi \
/services?name=garbage-collector | json -Ha uuid) | \
json -Ha uuid metadata.GC_ASSIGNED_SHARDS
Verify that the manta_fastdelete_queue
exists on all index shards
The output of this command should show a json object describing the
manta_fastdelete_queue
for all index shards.
manta-oneach -s moray \
"getbucket manta_fastdelete_queue && cat /var/tmp/metadata.json | json SERVICE_NAME"
Verify that the owning account is snaplink-disabled
The accelerated garbage-collection pipeline will not operate on objects that are not created or owned by a snaplink-disabled account. To verify that the account whose objects are being deleted get garbage-collected:
headnode$ UUID=$(pfexec sdc-mahi /account/<login> | json -Ha account.uuid)
headnode$ sdc-sapi /applications?name=manta | \
json -Ha metadata.ACCOUNTS_SNAPLINKS_DISABLED | json -Ha uuid | \
grep $UUID
Progress Checks
If all of the previous checks in your Manta deployment pass, but garbage-collection does not seem to be making progress:
Verify records are being added to the manta_fastdelete_queue
A simple way to do this is to login to the Manatee primary and manually check
the number of records in the manta_fastdelete_queue
for some time. To find the
Manatee primary peer for a given shard, query the status server on each postgres
instance in your deployment:
headnode$ manta-oneach -s postgres \
"curl -X GET localhost:5433/state | json role"
After determining the zone uuid, manta-login
into the instance and run:
primary$ while true; psql -d moray -U postgres -P format=unaligned -t -c \
"select count(*) from manta_fastdelete_queue"; sleep 5; done;
This command will sample the number of entries in the queue every 5 seconds. Do not use this solution when making a large number of deletes or have any reason to think that the queue is large. Running a table scan could further stall the garbage collection pipeline.
If there is a pgstatsmon
instance available, use the pg_row_estimate
gauge
instead. This gauge is known to not be accurate, but it should report a non-zero
value if new records have been added recently.
Verify the garbage-collectors are reading records from manta_fastdelete_queue
The garbage-collector runs findObjects
every GC_RECORD_READ_WAIT_INTERVAL
milliseconds. This findObjects queries the oldest (sorted by _mtime
)
GC_RECORD_READ_BATCH_SIZE
records from the table. Every record the
garbage-collector reads can be found by searching through the service log. Newly
discovered records will be reported by the reader:
headnode$ tail -F $(svcs -L garbage-collector) | grep "MorayDeleteRecordReader" | bunyan -p
Verify Delete instructions are being uploaded
By default, delete instructions are uploaded as objects to
/poseidon/stor/manta_gc/mako/STORAGE_ID
. Here, STORAGE_ID
is the DNS name
of the storage server for which the contained instructions are intended. Each
instruction is named as follows:
DATE-INSTANCE_UUID-X-UUID-mako-STORAGE_ID
Here:
- DATE
is a UTC timestamp indicating when the instruction was generated.
- INSTANCE_UUID
is the zone uuid of the garbage-collector instance that
uploaded the instruction.
- UUID
is a uuid generated for each instruction object.
- STORAGE_ID
is the DNS name of the shark for which the instruction is
intended.
Today, the name of the instruction object is arbitrary. The cron job processing
the instructions finds out about them using a listing of the parent directory,
/poseidon/stor/manta_gc/mako/STORAGE_ID
.
Each instruction contains a variable number of lines referring to object backing-files on a storage server. These are formatted to match the expectations of the existing storage server cron job. For more about this format and running Mako cleaning steps manually, see documentation in the Mola consolidation.
To check the number of instruction objects for a particular shark:
ops$ minfo /poseidon/stor/manta_gc/mako/SHARK | grep "result-set-size" | \
cut -d' ' -f2
If there are snaplink-disabled deletes happening in Manta, the number printed by this command should increase. Instructions will not be removed from this directory until the next time the gc cron job on the corresponding shark runs. If no deletes have happened in a while, and the instruction directory is large, there could be a problem with the GC cron job running on the shark.
To check the timestamp of the most recently uploaded instruction for shark
STORAGE_ID
:
ops$ mls -lt /poseidon/stor/manta_gc/mako/STORAGE_ID
If there are deletes happening in Manta and the most recently uploaded object was modified too far in the past, it may indicate a problem with the garbage-collectors (which are responsible for uploading new instruction objects as user objects are deleted).
Verify Delete records are being cleaned
Delete records are removed from the manta_fastdelete_queue
after the object to
which they refer has been included in an instruction object. The garbage-collector
uses the Moray batch
RPC to delete records from this queue. node-artedi
metrics exposed by the node-moray client can be used to determine whether the
requests are successful. The garbage-collector also exposes a node-artedi
metric called gc_delete_records_cleaned
, which is a count of the total number
of rows deleted from a manta_fastdelete_queue
by shard.
Operators can also check record cleaning progress by inspecting the
manta_fastdelete_queue
table directly:
postgres$ while true; do psql -d moray -U postgres -c \
"select count(*) from manta_fastdelete_queue"; sleep 5; done;
It is not, in general, safe to run this command in production where the manta_fastdelete_queue could be large. Once deletes stop, the value printed by this command should steadily drift down to 0. If it does not, this could indicate a problem with one of the garbage-collectors processing records from this shard.
As before, if pgstatsmon is available, the pg_row_estimate
metric for the
manta_fastdelete_queue
relation is a safer alternative to the above command
(though it is less precise and may indicate that some rows exist when they
really do not).
Check for bloated garbage-collector processes
The garbage-collector caches instructions to upload to Manta, and records to delete
from the manta_fastdelete_queue
. The purpose of this caching is to enable
these requests to be done in batches. The garbage-collector exposes an http
admin endpoint to give operators some sense of how large each of these caches is:
garbage-collector$ curl -X GET localhost:2020/workers/get
{
"1.moray.orbit.example.com": {
"manta_fastdelete_queue": [
{
"component": "worker",
"state": "running",
"actors": [
{
"component": "reader",
"bucket": "manta_fastdelete_queue",
"state": "waiting"
},
{
"component": "transformer",
"state": "running",
"cached": 128
},
{
"component": "instruction uploader",
"state": "running"
},
{
"component": "cleaner",
"state": "running",
"cached": 128
}
]
},
{
"component": "worker",
"state": "running",
"actors": [
{
"component": "reader",
"bucket": "manta_fastdelete_queue",
"state": "waiting"
},
{
"component": "transformer",
"state": "running",
"cached": 512
},
{
"component": "instruction uploader",
"state": "running"
},
{
"component": "cleaner",
"state": "running",
"cached": 0
}
]
}
]
}
The output of the above command describes a collector reading records from the
manta_fastdelete_queue
from shard 1 of the Manta deployment. The concurrency
of the collector corresponds with the number of workers (2).
- The
cached
field of thetransformer
actor in each worker describes how many instructions the collector is ready to upload to Manta, but has not yet. - The
cached
field of thecleaner
actor in each workers describes how many instructions the collector is ready to remove from the shard (1.moray
in this case).
The caches may grow if:
- A downstream component of the collector experiences an error
- The rate of API delete calls grows
The first case can usually be seen in the output of GET /workers/get
above as
the state
field of some component being "error". Diagnosing the problem
further will usually depend on log analysis, but this can be sped up by
searching for the name of the component in the error state. For example, if the
cleaner is in the "error" state:
{
"component": "worker",
"state": "running",
"actors": [
{
"component": "reader",
"bucket": "manta_fastdelete_queue",
"state": "waiting"
},
{
"component": "transformer",
"state": "running",
"cached": 512
},
{
"component": "instruction uploader",
"state": "running"
},
{
"component": "cleaner",
"state": "error",
"cached": 0
}
]
}
The particular error can be located faster in the service logs with:
garbage-collector$ cat $(svcs -L garbage-collector) | \
grep MorayDeleteRecordCleaner | bunyan -p
See the garbage-collector documentation for a list of the full actor names.
Common Tweaks
There are a couple of issues that may arise in the lifetime of a garbage-collector that can be solved by tweaking a tunable. This section covers a few of these.
Overlapping Workers
Each garbage-collector stores an offset into the manta_fastdelete_queue
of the
shard it is reading from locally and allows it to wrap around to zero once the
queue is exhausted. This issue can result in an overlap in which multiple
garbage-collector workers, or multiple garbage-collector instances processing
records from the same shard, operate in lock-step: reading, and attempting to
delete the same records.
If the rate of deletes in a given deployment is expected to be small, this
problem can be mitigated by decreasing GC_RECORD_READ_BATCH_SIZE
so that the
collector processes the queue in smaller chunks.
Excessive Instruction Object Count
garbage-collector instances upload instruction objects containing batches of
object files to be removed from shrimps. A large number of such instruction
objects results in metadata overhead and can slow down the rate at which
mako_gc.sh
processes them (mako_gc.sh
will process at most 256 at a time).
Increasing GC_INSTR_UPLOAD_BATCH_SIZE
can mitigate this problem. If it does
not, increasing GC_INSTR_UPLOAD_FLUSH_DELAY
can also help by forcing the
garbage-collectors to wait for more delete records to come in before uploading
the next cleanup instruction for a given shrimp.
Debugging Marlin: storage nodes
Figuring out what's running
mrjob only shows overall system state. Once a task is issued to a server, you
have to contact the agent running on that server to figure out the status. The
dashboard shows running groups and streams, but you can get more information by
logging into the box and running the "mrgroups" and "mrzones" tools.
Continuing the above example, 25.cn.us-east.joyent.us corresponds to MS08214 in
us-east-1, so we can log into that box and run mrgroups
:
[root@MS08214 (us-east-1) ~]# mrgroups
JOBID PH NTASKS RUN SHARE LOGIN
4ff04c4d-4540-483d-94ca-d515320d2b9d 0 0 1 1 dap
946587d1-3ef6-46d5-b139-186d59813f9d 3 1 0 1 poseidon
"Groups" refer to a bunch of tasks from the same job and phase. A two-phase job will have two groups on each physical server where it's running. Each group may have multiple "streams" associated with it, each corresponding to a compute zone where tasks are running. We can see these with:
[root@MS08214 (us-east-1) ~]# mrgroups -s
JOBID PH ZONE LAST START
4ff04c4d... 0 1118c00b-4729-4c18-a289-f54afe2d9e9d 2013-07-02T22:16:17.746Z
946587d1... 3 4836fd7b-d80d-4b2d-8519-8955ca5621ff 2013-07-02T22:20:30.068Z
In this simple case, each of the two jobs running on this box has one group, and each group has one zone. But in general:
- On a given box, you can have many groups for each job -- one for each phase.
- On a given box, for a given group, you can have many streams -- one for each zone that's been assigned to that group.
You can even see exactly what processes the user's job is running:
[root@MS08214 (us-east-1) ~]# mrgroups -sv
JOBID PH ZONE LAST START
4ff04c4d... 0 1118c00b-4729-4c18-a289-f54afe2d9e9d 2013-07-02T22:16:17.746Z
90397 ./node lib/agent.js
90403 /bin/bash --norc
This is useful when a user complains of a hung job or something and you want to go see exactly what it's doing. The full procedure is:
- Use "mrjob" or "findobjects" to find the task of interest (usually, one of the only running tasks) and figure out which machine it's running on.
- ssh to the machine it's running on.
- Run
mrgroups -sv
to view running streams on that box and the processes they're running - Use truss, DTrace, or whatever other tools you usually use for inspecting process state -- with the usual caveats about interfering with production systems.
The user task's stdout and stderr are saved to /var/tmp/marlin_task inside the zone. These are the stdout and stderr files that will be saved to Manta when the task completes, so do not modify or remove them!
Figuring out what ran in the past
After the job has completed, all we save is the lackey log (see above). That's currently saved for a few days in the global zone, under /var/smartdc/marlin/log/zones. Files are named JOBID.PHASENUM.UUID. The usual way to find the right one is to find the taskId that you're debugging as described above, and then:
shrimp-gz$ grep -l TASKID /var/smartdc/marlin/log/zones/JOBID.*
That usually returns pretty quickly, and you can view the file with bunyan(1).
Lackey logs are not currently rotated up to Manta. They are removed after a few days.
Debugging Marlin: anticipated frequent issues
Users want more information about job progress
The "mjob get" output for a job includes a count of tasks issued and tasks completed. This can be used to measure progress. If you've got a 100-object map job where each input produces one output, there will be 100 tasks issued, and when they all complete, the job is done. If you tack on a second phase to that job with count=2 reducers, there will be 102 tasks, and so on.
In general, the user can figure out how many tasks a job should have, but Manta can't necessarily infer this in many cases. That's because each task can emit any number of output objects. So if you have a two-phase map-map job and feed in 100 inputs, you could emit 1, 2, 5, or 100 outputs from each task in the first phase, and Manta has know way to know. That's why the only progress Manta provides is number of tasks issued and number of tasks completed, from which a user may be able to compute their own measure of progress.
Users observe non-zero count of errors from "mjob get"
See "Fetch summary of errors for a job" above. Most error messages should be pretty self-explanatory, but some of the more complicated ones are described below.
Users observe non-zero count of retries from "mjob get"
Besides the "tasks issued", "tasks completed", and error counters, the "mjob get" output for a job also shows a count of retries. These aren't generally actionable for users except to explain latency.
Retries represent internal failures that the system believes may be transient. There are currently three causes:
- An agent crashed. This is the most common. When an agent crashes, all tasks that were running or queued on that system are retried, preferably on other systems. There may be a latency hit for restarting or requeueing the task, but it shouldn't impact correctness.
- An agent failed to heartbeat for a full minute, possibly a result of a system panic, network partition, or excessive load. The same thing happens as for an agent crash.
- The user hits a condition where Marlin allocated a large number of zones to the job, but later decided to forcibly take some of those zones back.
You can find out exactly what caused the retries using "mrerrors -j JOBID". See "Fetch summary of errors for a job" above.
User observes job in "queued" state
Jobs enter the "queued" state when they're submitted, but should move to "running" very quickly, even if Manta's compute resources are all tied up. If jobs remain in state "queued" for more than a minute, there are several things to check:
- Run a simple no-op job, like "mjob create -m wc < /dev/null". That job should complete within a second or two without dispatching any tasks. If it does, there's likely something invalid about the user's job that the system failed to handle properly. Check the corresponding jobsupervisor's log (see "Figuring out which jobsupervisor is managing a job").
- If that test job remains queued for a minute, check that the jobsupervisor services are healthy (namely, that the SMF service is running, not in maintenance). If they're maintenance, try clearing one. If it comes up, it should pick up your test job and run it.
- If any jobsupervisors are healthy but all jobs are still queued, check the supervisor logs for recent errors (with "bunyan -lerror"). It's likely that they're not able to connect to the Marlin Moray shard, in which case the next step is to check whether Moray is working.
Job hung (not making forward progress)
A job is making forward progress if any of the counters shown by "mjob get" are incremented over time. If the counters stay steady, there may be a Marlin issue, but there may also be a user error or simply a long-running task.
- The first thing to check is whether the user has ended the input stream. "mjob get" will report "inputDone": true once the input stream has been ended. If the input stream is not ended, Marlin is waiting for the user to submit inputs.
- Check if there are any tasks outstanding. See "List tasks not-yet-completed for a given job", and then investigate with "Figuring out what's running".
- If nothing's running, check that the jobsupervisor responsible for this job is healthy. See "Figuring out which jobsupervisor is managing a job".
Poor job performance
Alongside "mrjob" and "mrerrors" is a tool called "mrjobreport" which prints out a summary of time spent processing a job. This can be used to tell where time was spent: dispatching tasks, queued behind other tasks, executing, or committing the results. It can also identify the slowest tasks. You can then look at the lackey log from those jobs to figure out why they took so long.
For smaller jobs, you can also use "mrjob log JOBID", which prints out a log of everything that happened for a job. You can use this to find long periods where nothing happened.
Error: User Task Error (for unknown reason)
User task errors usually indicate that the user's script either exited with a non-zero status, or one of the user's processes dumped core. The error message should generally be pretty clear, and where appropriate should have a link to the stderr and core file. (Stderr is not saved for successful tasks.)
If a user can't figure out why their bash script exited with non-zero status, check if they're running afoul of bash's pipeline exit semantics. From bash(1):
The return status of a pipeline is the exit status of the last com-
mand, unless the pipefail option is enabled. If pipefail is enabled,
the pipeline's return status is the value of the last (rightmost)
command to exit with a non-zero status, or zero if all commands exit
successfully.
Users likely want to be setting pipefail, which you can do using "set -o pipefail" right in the bash script.
Error: Task Init Error
There are several common causes of TaskInitErrors, and the error message should generally be clear in each case:
- an asset failed to be downloaded (the HTTP status code will be included in the error message)
- the user had an "init" script which either returned a non-zero exit status or dumped core
- Requested image is not available: this is supposed to be emitted when the user asks for an image that is not supported using the "image" property of a job. If the user did not ask for any image, see below.
- Not enough memory available: the user asked for more memory than the default, and all of the memory on the system they were assigned to was spoken for. The task may succeed later. We should be keeping track of these stats so that we can see if we need to allocate more memory to Marlin.
- Not enough disk available: same as memory, but for disk.
Note that the memory and disk errors are different from the similar UserTaskErrors "user task ran out of memory" and "user task ran out of local disk space", which mean that the task actually did run, but bumped up against the requested limits. The user should ask for more memory or disk, respectively.
More esoteric errors indicate more serious Marlin issues:
- "Requested image is not available," and the user did not request any particular image. We've seen this in cases where the Marlin agent was enabled on a node other than a Manta storage node (e.g., a CN hosting the metadata services). Audit that the only instances of marlin-agent enabled in the whole fleet are the ones on the Manta storage nodes (shrimps).
Error: Internal Error
Users should never see internal errors. Transient ones are generally retried, and persistent ones often represent serious issues. Use "mrerrors -j JOBID" to see the details, including the internal error message.
The most common cause is "lackey timeout". This can be a result of user error (e.g., if the user pstops the lackey, or kills it, possibly by trying to halt the zone), or it can indicate that the lackey crashed. Look for core files in the zone and file a bug. You can also look in the lackey log to see why it crashed.
One error we've seen is ": not connected: ". This is issued by a jobsupervisor when attempting to locate an object, but when it fails to contact the electric-moray service. Check supervisor health, look for errors in the log, and check whether electric-moray is online.
Zones not resetting
There have been a few bugs where Marlin zone resets hang. For a single zone, this just reduces capacity, usually by an immeasurable amount. In some cases, this ends up affecting all zones on a system, in which case forward progress for nearly all jobs can be impacted. These situations are always bugs, and if possible they should be root-caused so they can be fixed. There are open tickets for improving the system's resilience to this kind of problem.
When you suspect a particular zone's reset is hung (e.g., because it's been resetting for at least 10 minutes), log into the GZ of that system and look at processes in the Marlin agent service. Here's what a normal service looks like:
[root@RA10146 (staging-1) ~]# svcs -p marlin-agent
STATE STIME FMRI
online Sep_15 svc:/smartdc/agent/marlin-agent:default
Sep_15 27668 node
Sep_15 28118 node
The marlin agent normally comprises two node processes, and their STIME indicates when they started. If you see a number of other processes that have been running for several minutes, that's generally a sign that things are in bad shape. Here's an example:
[root@RM08211 (us-east-2) ~]# svcs -p marlin-agent
STATE STIME FMRI
online Dec_20 svc:/smartdc/agent/marlin-agent:default
16:54:16 15450 vmadm
9:47:17 20230 zfs
Dec_20 95665 node
Dec_20 95666 node
This output shows that the "zfs" process has been hung for at least 7 hours. At that point, the next step in root cause analysis would be to understand why the "zfs" process is hung using the usual tools (ps(1), pstack(1), pfiles(1), mdb(1), and so on). The details depend on the specific bug you've found.
This is just an example. The hung process may be something other than "zfs".
For some pathologies, a zone reset may be hung without an associated process. This can happen when a zone fails to boot properly. In this case, use the Kang output from the Marlin agent to see what stage of boot is hung. See "Kang state" below. For example, you may see a zone's kang state that looks like this:
"070fbff6-1579-4147-a539-b43b3aa54306": {
"zonename": "070fbff6-1579-4147-a539-b43b3aa54306",
"state": "uninit",
"pipeline": {
"operations": [
{
"funcname": "maZoneCleanupServer",
"status": "ok"
},
...
{
"funcname": "maZoneReadyBoot",
"status": "ok",
"err": null,
"result": ""
},
{
"funcname": "maZoneReadyWaitBooted",
"status": "pending"
},
The "Boot" stage, which issues the command to boot the zone, has completed successfully. The "WaitBooted" stage is "pending". This output indicates that Marlin is waiting for the zone to boot up. It's worth checking that Marlin really is watching the zone's state (and hasn't somehow forgotten about it). The easiest way to do that is to use a D script to watch processes that the agent forks, like this:
# dtrace -n 'exec-success/ppid == 95665 || ppid == 95666/{ printf("%s", curpsinfo->pr_psargs); }'
dtrace: description 'exec-success' matched 1 probe
CPU ID FUNCTION:NAME
8 14952 exec_common:exec-success svcs -H -z 070fbff6-1579-4147-a539-b43b3aa54306 -ostate milestone/multi-user:de
19 14952 exec_common:exec-success svcs -H -z 070fbff6-1579-4147-a539-b43b3aa54306 -ostate milestone/multi-user:de
(You'll need to replace the two ppid conditions with the two Marlin agent processes on your system.) We can see from this output that Marlin is checking the status of that zone as expected, so the problem is that the zone isn't coming up. Again, the next step depends on the specific bug you've run into.
Debugging Marlin: Zones
Clearing Disabled Zones
On occasion, a compute zone may transition to the "disabled" state. These zones appear red on the Marlin dashboard and mrzones will report the same:
[root@RM08211 (us-east-2) ~]# mrzones
5 busy
1 disabled
122 ready
1 uninit
Use mrzones -x
to determine the reason for the zone being disabled:
[root@RM08211 (us-east-2) ~]# mrzones -x
3cf7ccc4-4da2-4a0a-b111-ef4e0c2e04cc (since 2014-07-25T03:00:28.001Z)
zone not ready: command "zfs rollback zones/3cf7ccc4-4da2-4a0a-b111-ef4e0c2e04cc@marlin_init" failed with stderr: cannot open 'zones/3cf7ccc4-4da2-4a0a-b111-ef4e0c2e04cc@marlin_init': dataset does not exist : child exited with status 1
Alternatively, the Marlin Dashboard lists the disabled zones and the cause under the "Disabled Zones" tab on the bottom section. Common problems and solutions are listed below.
zone not ready: command "zfs rollback zones/[zonename]@marlin_init" failed with stderr: cannot open 'zones/zonename@marlin_init': dataset does not exist : child exited with status 1
This is an aborted zfs create/destroy. The solution is to manta-undeploy
the zone and manta-deploy
a new one.
zone failed (lackey timed out)
Usually a lackey timeout can be fixed by re-registering the zone with the marlin agent. From the global zone where the disabled zone is, run:
mrzone [zonename]
Alternatively, you can manta-undeploy
and manta-deploy
a new one on that
compute node.
Controlling Marlin
Occasionally it may be necessary or desirable to modify the running Marlin system.
Cancel a running job
Use mrjob cancel JOBID
, which produces no output on success. This is a last
resort option for jobs that have run amok. Any time this is necessary, there's
likely an underlying software bug that needs to be filed and fixed.
Deleting a job
In rare instances (always involving a serious Marlin bug), the presence of a job may disrupt the system so much that cancelling it is not tenable or not sufficient to stabilize the system. In such cases, it's possible to delete the job, which removes all records associated with the job from Moray.
If the job has already been completed and archived (has "timeArchiveDone" set), deleting a job has only a small user-facing impact: the user will no longer be able to fetch inputs, outputs, errors, and so on from the "live" API. They will be able to fetch them through the archived objects (in.txt, out.txt, and so on). See the user-facing REST API documentation for details. This transition happens anyway for all jobs after a few hours; deleting an archived job only has the effect of making this transition happen immediately.
If the job has not been completed or has not been archived, deleting the job will result in data loss for the user. In particular, the inputs, outputs, errors, and so on will all be lost permanently. This can also have an unpredictable impact on the rest of Marlin, which is not designed to have state removed while a job is running. This operation should be used with extreme care, and likely only in emergencies.
To delete a job, use mrjob delete JOBID
. Be sure to have read the above
caveats.
Quiescing a supervisor
It's possible to quiesce a supervisor, which causes that supervisor to continue processing whatever jobs it's working on, but to avoid picking up new jobs. This is useful when the supervisor is being removed from service (as during some upgrades), or in cases where the supervisor has become clogged due to a bug but is still picking up new jobs (that are then becoming hung).
The "mrsup" command can be used to both quiesce and unquiesce a supervisor. These commands produce no output on success, but cause entries to be written to the supervisor log. The quiesce state is not persistent, so if the supervisor crashes or restarts for another reason, it will start picking up new jobs when it comes up again.
Advanced deployment notes
These notes are intended primarily for developers.
Size Overrides
Application and service configs can be found under the config
directory in
manta-deployment.git. For example:
config/application.json
config/services/jobsupervisor/service.json
config/services/webapi/service.json
Sometimes it is necessary to have size-specific overrides for these services
within these configs that apply during setup. The size-specific override
is in the same directory as the "normal" file and has .[size]
as a suffix.
For example, this is the service config and the production override for the
jobsupervisor:
config/services/jobsupervisor/service.json
config/services/jobsupervisor/service.json.production
The contents of the override are only the differences. Taking the above example:
cat config/services/jobsupervisor/service.json
{
"params": {
"networks": [ "manta", "admin" ],
"ram": 256
}
}
$ cat config/services/jobsupervisor/service.json.production
{
"params": {
"ram": 16384,
"quota": 100
}
}
You can see what the merged config with look like with the
./bin/manta-merge-config
command. For example:
./bin/manta-merge-config -s coal jobsupervisor
{
"params": {
"networks": [
"manta",
"admin"
],
"ram": 256
}
}
$ ./bin/manta-merge-config -s production jobsupervisor
{
"params": {
"networks": [
"manta",
"admin"
],
"ram": 16384,
"quota": 100
}
}
Note that after setup, the configs are stored in SAPI. Any changes to these files will not result in accidental changes in production (or any other stage). Changes must be made via the SAPI api (see the SAPI docs for details).
Development tools
Downloading the images take a long time, so in the manta-deployment repository there's the tools/install_marlin_image.sh script. This script:
manta$ ./tools/install_marlin_image.sh <machine>
will download the latest marlin image from updates.joyent.com, save it on that machine on which the script is run, and copy it to the machine's IMGAPI. On subsequent runs, this script will copy the image from the local machine and avoid downloading it again from updates.joyent.com. Because the manta-compute image is larger than all other images combined, using install_marlin_image.sh will shorten the development cycle.
To update the manta-deployment zone on a machine with changes you've made to sdc-manta:
sdc-manta.git$ ./tools/update_manta_zone.sh <machine>
To see which manta zones are deployed, use manta-adm show:
headnode$ manta-adm show
To tear down an existing manta deployment, use manta-factoryreset:
manta$ manta-factoryreset
Configuring NAT for Marlin compute zones
Recall that while we want users to be able to access the internet from Marlin zones, we don't want to give each zone a public IP. In production, we configure a hardware NAT on the private network that the compute zones use, but in development, this connectivity is usually absent. As a result, among other things, mlogin(1) doesn't work.
In a development environment, we can use a simple NAT zone to allow users to access the 'external' network by creating a NAT zone. Note that while this configuration is likely to be sufficient for development use, it is not a highly-available solution and should not be used for production deployments.
The following instructions describe how to create a NAT zone.
First, create a VMAPI CreateVM payload that looks like this:
{
"uuid": "18af1ec0-9976-11e8-b80d-bfdc56a11139",
"owner_uuid": "60575e4e-ab96-40ae-8913-a0597b009afa",
"brand": "joyent",
"ram": 256,
"image_uuid": "04a48d7d-6bb5-4e83-8c3b-e60a99e0f48f",
"networks": [ {
"name": "external",
"primary": true,
"allow_ip_spoofing": true
}, {
"name": "mantanat",
"allow_ip_spoofing": true
} ],
"alias": "forwarder",
"hostname": "forwarder",
"server_uuid": "564d3f7a-1bee-1af9-2711-bed3da5551c6"
}
Be sure to make the following changes:
uuid should be a randomly-generated uuid (e.g., from the uuid(1) command)
owner_uuid should be poseidon's uuid (i.e., from "sdc-ldap search objectclass=sdcperson")
server_uuid should be our development server's uuid (e.g., "sdc-cnapi /servers | json -Ha uuid")
mantanat is the name of the network used by marlin in these examples, and in the default 'coal' configuration. Your configuration may vary and references to 'mantanat' in the instructions below should be adjusted to reflect your marlin network.
The image_uuid can be any reasonable SmartOS image. The above example uses triton-origin-multiarch-15.4.1, since it's currently guaranteed to be available.
Once we've made those changes, we can create the VM with:
sdc-vmadm create -f our_payload.json
Next we can login to the 'forwarder' zone and add the NAT configuration.
In this example, our 'external' network IP is 10.88.88.8 on the 'net0' interface and our 'mantanat' network is 10.66.66.7 on the 'net1' interface. The IP addresses in your 'forwarder' zone may differ.
[root@forwarder ~]# ifconfig
lo0: flags=2001000849<UP,LOOPBACK,RUNNING,MULTICAST,IPv4,VIRTUAL> mtu 8232 index 1
inet 127.0.0.1 netmask ff000000
net0: flags=1100843<UP,BROADCAST,RUNNING,MULTICAST,ROUTER,IPv4> mtu 1500 index 2
inet 10.88.88.8 netmask ffffff00 broadcast 10.88.88.255
ether 90:b8:d0:7d:da:ca
net1: flags=1100843<UP,BROADCAST,RUNNING,MULTICAST,ROUTER,IPv4> mtu 1500 index 3
inet 10.66.66.7 netmask ffffff00 broadcast 10.66.66.255
ether 90:b8:d0:7c:8f:a8
lo0: flags=2002000849<UP,LOOPBACK,RUNNING,MULTICAST,IPv6,VIRTUAL> mtu 8252 index 1
inet6 ::1/128
Use the following ipnat.conf file:
[root@forwarder ~]# cat /etc/ipf/ipnat.conf
map net0 10.66.66.0/24 -> 0/32 portmap tcp/udp auto
map net0 10.66.66.0/24 -> 0/32
Enable IP forwarding:
[root@forwarder ~]# routeadm -u -e ipv4-forwarding
Then enable ipfilter:
[root@forwarder ~]# svcadm enable ipfilter
Now we need to set the default gateway of the 'mantanat' network to point to our NAT-enabled 'forwarder' zone. To do this, determine the uuid of the mantanat network:
[root@headnode (coal-1) ~]# UUID=$(sdc-napi --no-headers /networks |
json -ac 'this.name === "mantanat"' uuid)
Now set the gateway to point at the IP address of the mantanat interface in the forwarder zone:
[root@headnode (coal-1) ~]# sdc-napi /networks/$UUID -X PUT \
-d@- <<< '{"gateway": "10.66.66.7"}'
Finally, we restart the marlin-agent on the headnode, which will cause the marlin zones to reboot, and to be configured with the updated gateway.
[root@headnode (coal-1) ~]# svcadm restart marlin-agent
Having done this, we should see that when logging into any of the marlin compute zones, our default gateway has changed, and we are able to reach external addresses:
[root@headnode (coal-1) ~]# vmadm list | grep marlin
0be5c6c1-8ae2-4249-ab64-8c6f1c54363e OS 1024 running marlin.coal.example.com-0be5c6c1
ab73226d-1a76-40c3-8a33-7dd731da20ed OS 1024 running marlin.coal.example.com-ab73226d
[root@headnode (coal-1) ~]# zlogin 0be5c6c1-8ae2-4249-ab64-8c6f1c54363e
.
.
.
[root@0be5c6c1-8ae2-4249-ab64-8c6f1c54363e ~]# netstat -rn | grep default
default 10.66.66.7 UG 1 2 net0
[root@0be5c6c1-8ae2-4249-ab64-8c6f1c54363e ~]# ifconfig
lo0: flags=2001000849<UP,LOOPBACK,RUNNING,MULTICAST,IPv4,VIRTUAL> mtu 8232 index 1
inet 127.0.0.1 netmask ff000000
net0: flags=1000843<UP,BROADCAST,RUNNING,MULTICAST,IPv4> mtu 1500 index 2
inet 10.66.66.5 netmask ffffff00 broadcast 10.66.66.255
ether 90:b8:d0:3f:37:e0
lo0: flags=2002000849<UP,LOOPBACK,RUNNING,MULTICAST,IPv6,VIRTUAL> mtu 8252 index 1
inet6 ::1/128
[root@0be5c6c1-8ae2-4249-ab64-8c6f1c54363e ~]# nslookup www.joyent.com
Server: 8.8.8.8
Address: 8.8.8.8#53
Non-authoritative answer:
.
.
.
We should also see that there are active sessions in the NAT tables in our 'forwarder' zone:
[root@forwarder ~]# ipnat -l
List of active MAP/Redirect filters:
map net0 10.66.66.0/24 -> 0.0.0.0/32 portmap tcp/udp auto
map net0 10.66.66.0/24 -> 0.0.0.0/32
List of active sessions:
MAP 10.66.66.6 51662 <- -> 10.88.88.8 2538 [8.8.8.8 53]
MAP 10.66.66.6 40025 <- -> 10.88.88.8 2745 [8.8.8.8 53]
At this point, we should be able to use mlogin with our usual manta credentials:
[root@test-machine ~]# env | grep MANTA
MANTA_USER=poseidon
MANTA_KEY_ID=50:c1:03:95:31:4c:6a:a2:ff:f6:4c:f0:58:24:50:72
MANTA_URL=https://10.88.88.7
MANTA_TLS_INSECURE=true
[root@test-machine ~]# mlogin
* created interactive job -- 27305f4c-61b7-ef62-bb7e-97aa871a263c
* waiting for session... | established
poseidon@manta # mdata-get sdc:uuid
0be5c6c1-8ae2-4249-ab64-8c6f1c54363e
poseidon@manta #
Configuration
Manta is deployed as a single SAPI application. Each manta service (moray, postgres, storage, etc.) has a corresponding SAPI service. Every zone which implements a manta service had a corresponding SAPI instance.
Within the config/ and manifests/ directories, there are several subdirectories which provide the SAPI configuration used for manta.
config/application.json Application definition
config/services Service definitions
manifests Configuration manifests
manifests/applications Configuration manifests for manta application
There's no static information for certain instances. Instead, manta-deploy will set a handful of instance-specific metadata (e.g. shard membership).
Configuration Updates
Once Manta has been deployed there will be cases where the service manifests must be changed. Only changing the manifest in this repository isn't sufficient. The manifests used to configure running instances (new and old) are the ones stored in SAPI. The service templates in the zone are not used after initial setup. To update service templates in a running environment (coal or production, for example):
1) Verify that your changes to configuration are backward compatible or that the updates will have no effect on running services.
2) Get the current configuration for your service:
headnode$ sdc-sapi /services?name=[service name]
If you can't find your service name, look for what you want with the following command:
headnode$ sdc-sapi /services?application_uuid=$(sdc-sapi /applications?name=manta | \
json -gHa uuid) | json -gHa uuid name
Take note of the service uuid and make sure you can fetch it with:
headnode$ sdc-sapi /services/[service uuid]
3) Identify the differences between the template in this repository and what is in SAPI.
4) Update the service template in SAPI. If it is a simple, one-parameter change, and the value of the key is a string type, it can be done like this:
headnode$ sapiadm update [service uuid] json.path=value
#Examples:
headnode$ sapiadm update 8386d8f5-d4ff-4b51-985a-061832b41179 \
params.tags.manta_storage_id=2.stor.us-east.joyent.us
headnode$ sapiadm update update 0b48c067-01bd-41ca-9f70-91bda65351b2 \
metadata.PG_DIR=/manatee/pg/data
If you require a complex type (an object or array) or a value that is not a
string, you will need to hand-craft the differences and |
to sapiadm
. For
example:
headnode$ echo '{ "metadata": { "PORT": 5040 } }' | \
sapiadm update fde6c6ed-eab6-4230-bb39-69c3cba80f15
Or if you want to "edit" what comes back from sapi:
headnode$ sapiadm get [service uuid] | json params >/tmp/params.json
#Edit params.txt to wrap the json structure in { "params": ... }
headnode$ cat /tmp/params.json | json -o json-0 | sapiadm update [service uuid]
5) Once the service in SAPI has been modified, make sure to get it to verify what SAPI has is what it should be.
Shard Management
A shard is a set of moray buckets, backed by >1 moray instances and >=3 Postgres instances. No data is shared between any two shards. Many other manta services may said to be "in a shard", but more accurately, they're using a particular shard.
There are three pieces of metadata which define how shards are used:
INDEX_MORAY_SHARDS Shards used for the indexing tier
MARLIN_MORAY_SHARD Shard used for marlin job records
STORAGE_MORAY_SHARD Shard used for minnow (manta_storage) records
Right now, marlin uses only a single shard.
Currently, the hash ring topology for electric-moray is created once during Manta setup and stored as an image in a Triton imgapi. The image uuid and imgapi endpoint are stored in the following sapi parameters:
HASH_RING_IMAGE The hash ring image uuid
HASH_RING_IMGAPI_SERVICE The imageapi that stores the image.
In a cross-datacenter deployment, the HASH_RING_IMGAPI_SERVICE may be in another datacenter. This limits your ability to deploy new electric-moray instances in the event of DC failure.
This topology is independent of what's set in manta-shardadm. WARNING UNDER NO CIRCUMSTANCES SHOULD THIS TOPOLOGY BE CHANGED ONCE MANTA HAS BEEN DEPLOYED, DOING SO WILL RESULT IN DATA CORRUPTION
See manta-deploy-lab for hash-ring generation examples.
The manta-shardadm tool lists shards and allows the addition of new ones:
manta$ manta-shardadm
Manage manta shards
Usage:
manta-shardadm [OPTIONS] COMMAND [ARGS...]
manta-shardadm help COMMAND
Options:
-h, --help Print help and exit.
--version Print version and exit.
Commands:
help (?) Help on a specific sub-command.
list List manta shards.
set Set manta shards.
In addition, the -z flag to manta-deploy specifies a particular shard for that instance. In the case of moray and postgres, that value defines which shard that instance participates in. For all other services, that value defines which shard an instance will consume.
Note that deploying a postgres or moray instance into a previously undefined shard will not automatically update the set of shards for the indexing tier. Because of the presence of the electric-moray proxy, adding an additional shard requires coordination with all existing shards, lest objects and requests be routed to an incorrect shard (and thereby inducing data corruption). If you find yourself adding additional capacity, deploy the new shard first, coordinate with all existing shards, then use manta-shardadm to add the shard to list of shards for the indexing tier.
Working with a Development VM that talks to COAL
Some people set up a distinct SmartOS VM that is a stable dev environment and
point it at COAL. Since the manta networking changes, you'll need to setup your
zone(s) with a NIC on the 10.77.77.X
network. Fortunately this is easy, so
get on your dev VM's GZ, and run:
dev-gz$ nictagadm add manta $(ifconfig e1000g0 | grep ether | awk '{print $2}')`
dev-gz$ echo '{ "add_nics": [ { "ip": "10.77.77.250", "netmask": "255.255.255.0", "nic_tag": "manta" } ] }' | vmadm update <VM>
Then reboot the zone.
Advanced Marlin Reference
The information in this section may be useful once you're familiar with Marlin internals. These are internal implementation details intended to help understand the system. It is completely unsupported to make any changes to the system outside of using a documented tool or following a Joyent support procedure. Everything in this section is subject to change without notice!
Internal state
As mentioned above, all of Marlin's state is stored using JSON records in Moray using several buckets:
- marlin_jobs_v2: When the user creates a job, muskie creates a record in this bucket. The global job state is stored in this record, and is periodically updated by the supervisor as execution progresses.
- marlin_jobinputs_v2: As users submit inputs, muskie creates records in this bucket.
- marlin_tasks_v2: Supervisors poll for new jobinputs, locate the corresponding objects, and assign work to agents by writing new records into this bucket. Agents poll for new tasks assigned to them in this bucket and then execute them.
- marlin_taskinputs_v2: For reduce tasks, which operate on many objects, the supervisor writes a separate record in this bucket for each input object.
- marlin_taskoutputs_v2: As tasks emit outputs, the agent writes records into this bucket. If the job has a subsequent phase, these outputs will become tasks or inputs for the next phase. Otherwise, they'll be marked job outputs.
- marlin_errors_v2: When supervisors or agents emit errors (including retryable errors), they write records into this bucket.
- marlin_health_v2: Unlike the other buckets, where each record is associated with a particular job, this bucket is only used by supervisors and agents to report health. There's one record per supervisor and per agent. See "Health checking" below.
This design may seem unnecessarily indirect in some cases, but it keeps each record small so that we can support streaming arbitrary numbers of objects through the system.
The schema for these buckets is not documented or stable, but you can find the latest version (with comments) on github.
Heartbeats, failures, and health checking
Supervisors and agents heartbeat periodically by writing records into the marlin_health_v2 bucket. Heartbeats are monitored by all supervisors.
The most common failure mode is a restart (crash). Since the supervisor state is entirely reconstructible from what's in Moray, supervisor restarts are pretty straightforward. For simplicity, agents always reset the world and start from a clean state when they come up. Supervisors detect agent restarts and abort and re-issue all outstanding tasks for that agent.
The other main failure mode is a hang or partition, manifested as a failure to heartbeat for an extended period. If this happens to a supervisor, another supervisor takes over the failed supervisor's jobs. When the failed one comes back, it coordinates to take over its work. If an agent disappears for an extended period, supervisors treat this much like a restart, by failing outstanding tasks and re-issuing them on other servers.
Lackeys heartbeat periodically by making HTTP requests to the agent. On failure, the agent fails the task.
If wrasse fails, archiving is delayed, but this has little effect on users. Wrasse recovers from restarts by rerunning any archives that were in progress.
Muskie instances are totally stateless. Restarts are trivially recoverable, and extended failures and partitions cause requests to be vectored to other instances.
Kang state
Jobsupervisors and agents export Kang entry points that describe their internal state. For agents, the HTTP server runs on port 9080, and you can get this state with:
headnode$ curl -si http://GZ_IP_ADDRESS:9080/kang/snapshot | json
For jobsupervisors, you can get this with:
headnode$ curl -si http://ZONE_IP_ADDRESS/kang/snapshot | json
This API is undocumented and unstable. It's the same one that feeds the marlin dashboard.
Fetching information about historical jobs
Jobs are archived once they complete. This process saves the job's public
json representation and the full lists of inputs, outputs, and errors into the
job's directory (/$MANTA_USER/jobs/$JOBID
). The job's json representation is
also saved into /poseidon/stor/job_archives/YYYY/MM/DD/HH
. For more on the
user-facing implications of archiving, see the public
docs.
About 24 hours after a job is archived, all of its records are removed from the
database. This is necessary to keep the jobs database from growing without
bound. At that point, none of the usual tools will work on that job, including
mrjob
, mrjobreport
, mrerrors -j
, and so on.
However, because we dump copies of the jobs database into Manta itself hourly,
you can still get all the information about the job. The mrextractjob
tool
takes a database dump directory (in Manta), a jobid, and a destination
directory. It scans the database dump and extracts all records related to the
job.
In summary, to get details about a job that has already been removed from the database:
Starting with the jobid, you'll need to figure out which hour's database dump the job's details will be stored in. You should use the database dump labeled after the job's "done" time, but within 24 hours of job completion.
a. If you don't know what date and time the job completed, but you know which account ran the job, then you can fetch the job's user-facing JSON file with:
mget /$MANTA_USER/jobs/$JOBID/job.json
You should probably do this as
poseidon
in theops
zone, which will avoid logging the request in the user's usage data (and charging the user for it).b. If you don't know what date and time the job completed or even which user ran it, or if the user already removed the job's directory, you can still find the job's JSON file under
/poseidon/stor/job_archives
. You'll run something like:mfind -t d -n $JOBID /poseidon/stor/job_archives
This will take a long time. The more you can narrow it down (by searching subdirectories of "job_archives"), the faster it will be. Assuming this returns a result, look for the job.json file inside that directory, which will have the job's completion time in it.
At this point, you should have the jobid and the job's completion time, which will tell you which database dump the job's records will be in. For example, if the job completed at 2014-05-05T11:07:05.519Z, you'll look at the dump for 2014/05/06/00 (the first dump after the completion time). All of the dumps are stored in
/poseidon/stor/manatee_backups
, under the shard designated as the jobs shard. For the us-east Manta deployment, the jobs shard is 1.moray.us-east.joyent.us. Putting all this together, the database dumps we care about would be in:/poseidon/stor/manatee_backups/1.moray.us-east.joyent.us/2014/05/06/00
Next, you'll run
mrextractjob
(from theops
zone). You can run it with no arguments for details, but basically you'll run something like this:mrextractjob \ /poseidon/stor/manatee_backups/1.moray.us-east.joyent.us/2014/05/06/00 \ /poseidon/stor/debug-fe4c6e2a \ fe4c6e2a-bc78-4c94-d4cd-c9f6a8931855
You should replace
/poseidon/stor/debug-fe4c6e2a
with whatever directory in Manta you want the extracted job files to go.This command should output something like this:
19f3d2fa-0dde-436f-a719-e250596298b9 added 6 inputs to 19f3d2fa-0dde-436f-a719-e250596298b9 mls -l "/dap/stor/debug-fe4c6e2a": -rwxr-xr-x 1 dap 0 May 29 17:00 errors.json -rwxr-xr-x 1 dap 694 May 29 17:00 jobinputs.json -rwxr-xr-x 1 dap 2875 May 29 17:00 jobs.json -rwxr-xr-x 1 dap 0 May 29 17:00 taskinputs.json -rwxr-xr-x 1 dap 955 May 29 17:00 taskoutputs.json -rwxr-xr-x 1 dap 2050 May 29 17:00 tasks.json
In this case, 19f3d2fa-0dde-436f-a719-e250596298b9 is the jobid for the Manta job that was used to extract the job we're interested in, which is fe4c6e2a-bc78-4c94-d4cd-c9f6a8931855. Now, the errors, job inputs, taskinputs, task outputs, tasks, and the raw job record are available in those directories. Unfortunately, there's not great tooling for summarizing extracted jobs (i.e., there's no analog to
mrjob log
ormrjobreport
), but you can use thejson
anddaggr
tools to pick apart these records.